RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 PELP1Q8IZL8 1130 aaKnown RBP8.35□□□□□ -1.07
PCDH9-203ENST00000456367 MYT1Q01538 1121 aa8.32□□□□□ -1.08
PCDH9-203ENST00000456367 NISCHQ9Y2I1 1504 aa8□□□□□ -1.13
PCDH9-203ENST00000456367 ZEB1P37275 1124 aaPredicted RBP7.94□□□□□ -1.14
PCDH9-203ENST00000456367 CENPBP07199 599 aaPredicted RBP7.89□□□□□ -1.15
PCDH9-203ENST00000456367 SUPT5HO00267 1087 aaKnown RBP7.84□□□□□ -1.15
PCDH9-203ENST00000456367 HRCP23327 699 aa7.77□□□□□ -1.17
PCDH9-203ENST00000456367 PCGF6Q9BYE7 350 aa7.77□□□□□ -1.17
PCDH9-203ENST00000456367 SLC24A1O60721 1099 aa7.74□□□□□ -1.17
PCDH9-203ENST00000456367 CCER1Q8TC90 406 aaPredicted RBP7.71□□□□□ -1.18
PCDH9-203ENST00000456367 DCAF8L2P0C7V8 631 aa7.7□□□□□ -1.18
PCDH9-203ENST00000456367 TTBK1Q5TCY1 1321 aaPredicted RBP7.68□□□□□ -1.18
PCDH9-203ENST00000456367 ERICH6Q7L0X2 663 aa7.64□□□□□ -1.19
PCDH9-203ENST00000456367 SHROOM4Q9ULL8 1493 aa7.57□□□□□ -1.2
PCDH9-203ENST00000456367 TRIM26Q12899 539 aaPredicted RBP7.57□□□□□ -1.2
PCDH9-203ENST00000456367 NEFLP07196 543 aa7.5□□□□□ -1.21
PCDH9-203ENST00000456367 APLP2Q06481 763 aa7.49□□□□□ -1.21
PCDH9-203ENST00000456367 YTHDC1Q96MU7 727 aaKnown RBP7.4□□□□□ -1.23
PCDH9-203ENST00000456367 PPARGC1BQ86YN6 1023 aaKnown RBP7.36□□□□□ -1.23
PCDH9-203ENST00000456367 TRIM41Q8WV44 630 aa7.35□□□□□ -1.23
PCDH9-203ENST00000456367 CLSPNQ9HAW4 1339 aa7.35□□□□□ -1.23
PCDH9-203ENST00000456367 ACIN1Q9UKV3 1341 aaKnown RBP7.34□□□□□ -1.23
PCDH9-203ENST00000456367 DIEXFQ68CQ4 756 aaKnown RBP7.33□□□□□ -1.24
PCDH9-203ENST00000456367 CHIC1Q5VXU3 224 aa7.32□□□□□ -1.24
PCDH9-203ENST00000456367 GTF3C3Q9Y5Q9 886 aa7.32□□□□□ -1.24
PCDH9-203ENST00000456367 FAM9AQ8IZU1 332 aaPredicted RBP7.31□□□□□ -1.24
PCDH9-203ENST00000456367 EHMT2Q96KQ7 1210 aa7.31□□□□□ -1.24
PCDH9-203ENST00000456367 MYT1LQ9UL68 1186 aa7.28□□□□□ -1.24
PCDH9-203ENST00000456367 RTL5Q5HYW3 569 aaPredicted RBP7.25□□□□□ -1.25
PCDH9-203ENST00000456367 DCAF1Q9Y4B6 1507 aa7.2□□□□□ -1.26
PCDH9-203ENST00000456367 DAXXQ9UER7 740 aaPredicted RBP7.2□□□□□ -1.26
PCDH9-203ENST00000456367 SCAF1Q9H7N4 1312 aaKnown RBP7.17□□□□□ -1.26
PCDH9-203ENST00000456367 ZNF316A6NFI3 1004 aaPredicted RBP7.16□□□□□ -1.26
PCDH9-203ENST00000456367 LOC105371045A0A1W2PR82 267 aa7.16□□□□□ -1.26
PCDH9-203ENST00000456367 UBTFP17480 764 aaKnown RBP7.15□□□□□ -1.26
PCDH9-203ENST00000456367 CDK11AQ9UQ88 783 aaPredicted RBP7.13□□□□□ -1.27
PCDH9-203ENST00000456367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.11□□□□□ -1.27
PCDH9-203ENST00000456367 RANGAP1P46060 587 aaPredicted RBP7.09□□□□□ -1.27
PCDH9-203ENST00000456367 PRKCSHP14314 528 aaPredicted RBP7.09□□□□□ -1.27
PCDH9-203ENST00000456367 GLIPR1L2Q4G1C9 344 aa7.09□□□□□ -1.27
PCDH9-203ENST00000456367 NEUROD1Q13562 356 aa7.08□□□□□ -1.28
PCDH9-203ENST00000456367 ANP32EQ9BTT0 268 aa7.06□□□□□ -1.28
PCDH9-203ENST00000456367 ANP32AP39687 249 aaKnown RBP7.01□□□□□ -1.29
PCDH9-203ENST00000456367 HNRNPUL2Q1KMD3 747 aaKnown RBP7.01□□□□□ -1.29
PCDH9-203ENST00000456367 CCDC180Q9P1Z9 1646 aa7□□□□□ -1.29
PCDH9-203ENST00000456367 ANP32CO43423 234 aa7□□□□□ -1.29
PCDH9-203ENST00000456367 BCANQ96GW7 911 aa6.98□□□□□ -1.29
PCDH9-203ENST00000456367 BCL11AQ9H165 835 aa6.97□□□□□ -1.29
PCDH9-203ENST00000456367 EIF5BO60841 1220 aaKnown RBP6.96□□□□□ -1.3
PCDH9-203ENST00000456367 FKBP8Q14318 412 aa6.93□□□□□ -1.3
PCDH9-203ENST00000456367 ATP1B4Q9UN42 357 aaPredicted RBP6.89□□□□□ -1.31
PCDH9-203ENST00000456367 ZBTB47Q9UFB7 747 aaPredicted RBP6.88□□□□□ -1.31
PCDH9-203ENST00000456367 ITGAEP38570 1179 aa6.85□□□□□ -1.31
PCDH9-203ENST00000456367 MIER1Q8N108 512 aa6.85□□□□□ -1.31
PCDH9-203ENST00000456367 ANP32BQ92688 251 aaKnown RBP6.82□□□□□ -1.32
PCDH9-203ENST00000456367 ERICH6BQ5W0A0 696 aa6.82□□□□□ -1.32
PCDH9-203ENST00000456367 PPM1GO15355 546 aaPredicted RBP6.81□□□□□ -1.32
PCDH9-203ENST00000456367 NCBP3Q53F19 620 aaKnown RBP6.8□□□□□ -1.32
PCDH9-203ENST00000456367 DDRGK1Q96HY6 314 aa6.8□□□□□ -1.32
PCDH9-203ENST00000456367 SUPT16HQ9Y5B9 1047 aaKnown RBP6.8□□□□□ -1.32
PCDH9-203ENST00000456367 NBR1Q14596 966 aa6.79□□□□□ -1.32
PCDH9-203ENST00000456367 POLR3GLQ9BT43 218 aa6.79□□□□□ -1.32
PCDH9-203ENST00000456367 MYO15BQ96JP2 1530 aa6.78□□□□□ -1.32
PCDH9-203ENST00000456367 HNRNPUQ00839 825 aaKnown RBP eCLIP6.77□□□□□ -1.33
PCDH9-203ENST00000456367 CCDC136Q96JN2 1154 aa6.77□□□□□ -1.33
PCDH9-203ENST00000456367 CSRNP3Q8WYN3 585 aa6.76□□□□□ -1.33
PCDH9-203ENST00000456367 NPM2Q86SE8 214 aaKnown RBP6.75□□□□□ -1.33
PCDH9-203ENST00000456367 UPF2Q9HAU5 1272 aaKnown RBP6.75□□□□□ -1.33
PCDH9-203ENST00000456367 NOP58Q9Y2X3 529 aaKnown RBP6.75□□□□□ -1.33
PCDH9-203ENST00000456367 DEKP35659 375 aaKnown RBP6.74□□□□□ -1.33
PCDH9-203ENST00000456367 FAM50AQ14320 339 aaKnown RBP6.74□□□□□ -1.33
PCDH9-203ENST00000456367 PPP4R2Q9NY27 417 aa6.73□□□□□ -1.33
PCDH9-203ENST00000456367 TNNT2P45379 298 aaPredicted RBP6.73□□□□□ -1.33
PCDH9-203ENST00000456367 NEFMP07197 916 aa6.73□□□□□ -1.33
PCDH9-203ENST00000456367 RBM19Q9Y4C8 960 aaKnown RBP6.72□□□□□ -1.33
PCDH9-203ENST00000456367 DDX10Q13206 875 aaKnown RBP6.72□□□□□ -1.33
PCDH9-203ENST00000456367 TSHZ2Q9NRE2 1034 aa6.72□□□□□ -1.33
PCDH9-203ENST00000456367 TONSLQ96HA7 1378 aa6.71□□□□□ -1.34
PCDH9-203ENST00000456367 ZCCHC6Q5VYS8 1495 aaKnown RBP6.71□□□□□ -1.34
PCDH9-203ENST00000456367 ARXQ96QS3 562 aa6.7□□□□□ -1.34
PCDH9-203ENST00000456367 EEA1Q15075 1411 aa6.7□□□□□ -1.34
PCDH9-203ENST00000456367 NCLP19338 710 aaKnown RBP6.7□□□□□ -1.34
PCDH9-203ENST00000456367 RTN4Q9NQC3 1192 aaKnown RBP6.7□□□□□ -1.34
PCDH9-203ENST00000456367 BECN1Q14457 450 aa6.69□□□□□ -1.34
PCDH9-203ENST00000456367 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.69□□□□□ -1.34
PCDH9-203ENST00000456367 TRIM52Q96A61 297 aa6.69□□□□□ -1.34
PCDH9-203ENST00000456367 CCER2I3L3R5 266 aa6.68□□□□□ -1.34
PCDH9-203ENST00000456367 TRIM44Q96DX7 344 aaPredicted RBP6.67□□□□□ -1.34
PCDH9-203ENST00000456367 CANXP27824 592 aaKnown RBP6.66□□□□□ -1.34
PCDH9-203ENST00000456367 CNGB1Q14028 1251 aaPredicted RBP6.66□□□□□ -1.34
PCDH9-203ENST00000456367 L1TD1Q5T7N2 865 aaKnown RBP6.66□□□□□ -1.34
PCDH9-203ENST00000456367 TIMELESSQ9UNS1 1208 aa6.65□□□□□ -1.34
PCDH9-203ENST00000456367 USP35Q9P2H5 1018 aa6.65□□□□□ -1.34
PCDH9-203ENST00000456367 AMER1Q5JTC6 1135 aaPredicted RBP6.64□□□□□ -1.35
PCDH9-203ENST00000456367 FANCIQ9NVI1 1328 aa6.64□□□□□ -1.35
PCDH9-203ENST00000456367 PLPPR3Q6T4P5 718 aa6.64□□□□□ -1.35
PCDH9-203ENST00000456367 FAM9BQ8IZU0 186 aa6.64□□□□□ -1.35
PCDH9-203ENST00000456367 MRS2Q9HD23 443 aa6.64□□□□□ -1.35
PCDH9-203ENST00000456367 HSP90AA1P07900 732 aaKnown RBP6.63□□□□□ -1.35
PCDH9-203ENST00000456367 RSPH6AQ9H0K4 717 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms