RNA–Protein interactions for RNA: ENST00000229332.11

CLEC4A-201, Transcript of C-type lectin domain family 4 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLEC4A, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLEC4A-201ENST00000229332 AEBP2Q6ZN18 517 aaPredicted RBP29.34■■■□□ 2.29
CLEC4A-201ENST00000229332 CHIC1Q5VXU3 224 aa28.35■■■□□ 2.13
CLEC4A-201ENST00000229332 SENP3Q9H4L4 574 aaPredicted RBP25.13■■□□□ 1.61
CLEC4A-201ENST00000229332 PHF23Q9BUL5 403 aaPredicted RBP24.79■■□□□ 1.56
CLEC4A-201ENST00000229332 FOXD1Q16676 465 aa23.27■■□□□ 1.32
CLEC4A-201ENST00000229332 PLPPR3Q6T4P5 718 aa22.89■■□□□ 1.25
CLEC4A-201ENST00000229332 PPP6R1Q9UPN7 881 aa22■■□□□ 1.11
CLEC4A-201ENST00000229332 ADRA2BP18089 450 aa21.99■■□□□ 1.11
CLEC4A-201ENST00000229332 PIAS4Q8N2W9 510 aaPredicted RBP21.91■■□□□ 1.1
CLEC4A-201ENST00000229332 MSH5O43196 834 aa21.76■■□□□ 1.07
CLEC4A-201ENST00000229332 POTEDQ86YR6 584 aa20.46■□□□□ 0.87
CLEC4A-201ENST00000229332 SCAF1Q9H7N4 1312 aaKnown RBP20.29■□□□□ 0.84
CLEC4A-201ENST00000229332 PPP4R3CPQ6ZMV5 832 aa20.07■□□□□ 0.8
CLEC4A-201ENST00000229332 MAPK8IP2Q13387 824 aaPredicted RBP20.04■□□□□ 0.8
CLEC4A-201ENST00000229332 DMRT2Q9Y5R5 561 aa19.94■□□□□ 0.78
CLEC4A-201ENST00000229332 CNKSR2Q8WXI2 1034 aa19.65■□□□□ 0.74
CLEC4A-201ENST00000229332 NCBP3Q53F19 620 aaKnown RBP19.51■□□□□ 0.71
CLEC4A-201ENST00000229332 HOXD11P31277 338 aaPredicted RBP19.36■□□□□ 0.69
CLEC4A-201ENST00000229332 RNF216Q9NWF9 866 aaPredicted RBP19.36■□□□□ 0.69
CLEC4A-201ENST00000229332 DCAF8L1A6NGE4 600 aa19.14■□□□□ 0.65
CLEC4A-201ENST00000229332 NPM3O75607 178 aaKnown RBP19.11■□□□□ 0.65
CLEC4A-201ENST00000229332 KCNA4P22459 653 aa19.07■□□□□ 0.64
CLEC4A-201ENST00000229332 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
CLEC4A-201ENST00000229332 RNF39Q9H2S5 420 aa18.52■□□□□ 0.56
CLEC4A-201ENST00000229332 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.49■□□□□ 0.55
CLEC4A-201ENST00000229332 CACNB1Q02641 598 aaPredicted RBP18.39■□□□□ 0.53
CLEC4A-201ENST00000229332 C1QBPQ07021 282 aaKnown RBP18.34■□□□□ 0.53
CLEC4A-201ENST00000229332 SLC4A1APQ9BWU0 796 aaKnown RBP18.14■□□□□ 0.49
CLEC4A-201ENST00000229332 SLC4A2P04920 1241 aa18.11■□□□□ 0.49
CLEC4A-201ENST00000229332 U3KPZ7 1027 aaPredicted RBP18.08■□□□□ 0.48
CLEC4A-201ENST00000229332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
CLEC4A-201ENST00000229332 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
CLEC4A-201ENST00000229332 APLP2Q06481 763 aa17.81■□□□□ 0.44
CLEC4A-201ENST00000229332 MYCNP04198 464 aaPredicted RBP17.75■□□□□ 0.43
CLEC4A-201ENST00000229332 FOXD4L1Q9NU39 408 aa17.75■□□□□ 0.43
CLEC4A-201ENST00000229332 SAMD1Q6SPF0 538 aaPredicted RBP17.73■□□□□ 0.43
CLEC4A-201ENST00000229332 CAPN15O75808 1086 aa17.72■□□□□ 0.43
CLEC4A-201ENST00000229332 SPINK5Q9NQ38 1064 aaPredicted RBP17.68■□□□□ 0.42
CLEC4A-201ENST00000229332 ZNF219Q9P2Y4 722 aaPredicted RBP17.56■□□□□ 0.4
CLEC4A-201ENST00000229332 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
CLEC4A-201ENST00000229332 ZBTB22O15209 634 aa17.47■□□□□ 0.39
CLEC4A-201ENST00000229332 DSG3P32926 999 aa17.47■□□□□ 0.39
CLEC4A-201ENST00000229332 ABCB7O75027 752 aa17.29■□□□□ 0.36
CLEC4A-201ENST00000229332 ATXN8OSP0DMR3 200 aa17.2■□□□□ 0.34
CLEC4A-201ENST00000229332 ATF5Q9Y2D1 282 aaPredicted RBP17.15■□□□□ 0.34
CLEC4A-201ENST00000229332 POLA2Q14181 598 aa17.12■□□□□ 0.33
CLEC4A-201ENST00000229332 EHMT2Q96KQ7 1210 aa17.09■□□□□ 0.33
CLEC4A-201ENST00000229332 CSRNP3Q8WYN3 585 aa17.07■□□□□ 0.32
CLEC4A-201ENST00000229332 ZBTB12Q9Y330 459 aaPredicted RBP16.91■□□□□ 0.3
CLEC4A-201ENST00000229332 RBM42Q9BTD8 480 aaKnown RBP16.78■□□□□ 0.28
CLEC4A-201ENST00000229332 FBLN2P98095 1184 aa16.65■□□□□ 0.26
CLEC4A-201ENST00000229332 OSCARQ8IYS5 282 aa16.53■□□□□ 0.24
CLEC4A-201ENST00000229332 AKT1S1Q96B36 256 aa16.43■□□□□ 0.22
CLEC4A-201ENST00000229332 MKRN4PQ13434 485 aaPredicted RBP16.41■□□□□ 0.22
CLEC4A-201ENST00000229332 SPDYE2BA6NHP3 402 aa16.37■□□□□ 0.21
CLEC4A-201ENST00000229332 SPDYE6P0CI01 402 aa16.37■□□□□ 0.21
CLEC4A-201ENST00000229332 SPDYE2Q495Y8 402 aa16.37■□□□□ 0.21
CLEC4A-201ENST00000229332 ZNF692Q9BU19 519 aaPredicted RBP16.22■□□□□ 0.19
CLEC4A-201ENST00000229332 REM2Q8IYK8 340 aaPredicted RBP16.21■□□□□ 0.19
CLEC4A-201ENST00000229332 CHRDL2Q6WN34 429 aa16.17■□□□□ 0.18
CLEC4A-201ENST00000229332 POTEHQ6S545 545 aa16.15■□□□□ 0.18
CLEC4A-201ENST00000229332 SSUH2Q9Y2M2 353 aa16.14■□□□□ 0.17
CLEC4A-201ENST00000229332 PITPNM1O00562 1244 aa16.03■□□□□ 0.16
CLEC4A-201ENST00000229332 SPDYE1Q8NFV5 336 aaPredicted RBP16■□□□□ 0.15
CLEC4A-201ENST00000229332 PABPN1Q86U42 306 aaKnown RBP eCLIP15.96■□□□□ 0.15
CLEC4A-201ENST00000229332 SPDYE4A6NLX3 237 aa15.93■□□□□ 0.14
CLEC4A-201ENST00000229332 CLEC11AQ9Y240 323 aa15.93■□□□□ 0.14
CLEC4A-201ENST00000229332 PIP4P2Q8N4L2 257 aa15.84■□□□□ 0.13
CLEC4A-201ENST00000229332 FXR2P51116 673 aaKnown RBP eCLIP15.83■□□□□ 0.12
CLEC4A-201ENST00000229332 PRR29P0C7W0 189 aa15.74■□□□□ 0.11
CLEC4A-201ENST00000229332 STAG3Q9UJ98 1225 aa15.71■□□□□ 0.11
CLEC4A-201ENST00000229332 PRKAR2AP13861 404 aaKnown RBP15.65■□□□□ 0.1
CLEC4A-201ENST00000229332 PROM2Q8N271 834 aa15.56■□□□□ 0.08
CLEC4A-201ENST00000229332 FKBP8Q14318 412 aa15.51■□□□□ 0.07
CLEC4A-201ENST00000229332 CHADLQ6NUI6 762 aa15.51■□□□□ 0.07
CLEC4A-201ENST00000229332 HAX1O00165 279 aa15.5■□□□□ 0.07
CLEC4A-201ENST00000229332 FARP1Q9Y4F1 1045 aaPredicted RBP15.37■□□□□ 0.05
CLEC4A-201ENST00000229332 CREBZFQ9NS37 354 aa15.35■□□□□ 0.05
CLEC4A-201ENST00000229332 SP7Q8TDD2 431 aaPredicted RBP15.33■□□□□ 0.04
CLEC4A-201ENST00000229332 C19orf67A6NJJ6 358 aa15.3■□□□□ 0.04
CLEC4A-201ENST00000229332 PLEKHG5O94827 1062 aa15.25■□□□□ 0.03
CLEC4A-201ENST00000229332 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
CLEC4A-201ENST00000229332 EVX2Q03828 476 aa15.2■□□□□ 0.02
CLEC4A-201ENST00000229332 CD44P16070 742 aaKnown RBP15.19■□□□□ 0.02
CLEC4A-201ENST00000229332 FBXO3Q9UK99 471 aa15.19■□□□□ 0.02
CLEC4A-201ENST00000229332 MIER1Q8N108 512 aa15.17■□□□□ 0.02
CLEC4A-201ENST00000229332 MNX1P50219 401 aaPredicted RBP15.12■□□□□ 0.01
CLEC4A-201ENST00000229332 PLCD3Q8N3E9 789 aa15.12■□□□□ 0.01
CLEC4A-201ENST00000229332 PAK3O75914 559 aaPredicted RBP15.1■□□□□ 0.01
CLEC4A-201ENST00000229332 ZBTB47Q9UFB7 747 aaPredicted RBP15.06■□□□□ 0
CLEC4A-201ENST00000229332 ZRANB1Q9UGI0 708 aa15.04■□□□□ -0
CLEC4A-201ENST00000229332 CLCN6P51797 869 aa15.02■□□□□ -0
CLEC4A-201ENST00000229332 GABBR2O75899 941 aa14.97□□□□□ -0.01
CLEC4A-201ENST00000229332 ZNF579Q8NAF0 562 aaKnown RBP14.97□□□□□ -0.01
CLEC4A-201ENST00000229332 VASPP50552 380 aaPredicted RBP14.9□□□□□ -0.02
CLEC4A-201ENST00000229332 TSPYL2Q9H2G4 693 aaPredicted RBP14.86□□□□□ -0.03
CLEC4A-201ENST00000229332 PHF12Q96QT6 1004 aa14.8□□□□□ -0.04
CLEC4A-201ENST00000229332 RASEFQ8IZ41 740 aa14.79□□□□□ -0.04
CLEC4A-201ENST00000229332 KLHL34Q8N239 644 aa14.79□□□□□ -0.04
CLEC4A-201ENST00000229332 NUBP1P53384 320 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms