Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPC1O15118 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
NPC1O15118 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1O15118 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.16□□□□□ -1.58
NPC1O15118 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1O15118 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1O15118 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1O15118 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
NPC1O15118 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1O15118 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
NPC1O15118 AL451142.2-201ENST00000429076 2090 ntBASIC5.16□□□□□ -1.58
NPC1O15118 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.16□□□□□ -1.58
NPC1O15118 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1O15118 AC083843.2-201ENST00000568248 6253 ntBASIC5.16□□□□□ -1.58
NPC1O15118 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
NPC1O15118 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
NPC1O15118 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1O15118 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1O15118 HMGB1P5-201ENST00000255320 642 ntBASIC5.16□□□□□ -1.58
NPC1O15118 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
NPC1O15118 RNA5SP223-201ENST00000365174 120 ntBASIC5.16□□□□□ -1.58
NPC1O15118 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1O15118 SFR1P1-201ENST00000403720 688 ntBASIC5.16□□□□□ -1.58
NPC1O15118 GSTA8P-201ENST00000404253 637 ntBASIC5.16□□□□□ -1.58
NPC1O15118 RNU6-575P-201ENST00000411326 105 ntBASIC5.16□□□□□ -1.58
NPC1O15118 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1O15118 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1O15118 HMGB1P49-201ENST00000418882 569 ntBASIC5.16□□□□□ -1.58
NPC1O15118 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1O15118 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.16□□□□□ -1.58
NPC1O15118 AC010099.3-201ENST00000423896 409 ntBASIC5.16□□□□□ -1.58
NPC1O15118 AL360081.1-201ENST00000428299 555 ntBASIC5.16□□□□□ -1.58
NPC1O15118 RPL19P16-201ENST00000433839 588 ntBASIC5.16□□□□□ -1.58
NPC1O15118 NANOGP2-201ENST00000435391 727 ntBASIC5.16□□□□□ -1.58
NPC1O15118 PPIAP17-201ENST00000438507 471 ntBASIC5.16□□□□□ -1.58
NPC1O15118 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.16□□□□□ -1.58
NPC1O15118 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1O15118 AL137845.2-201ENST00000444292 988 ntBASIC5.16□□□□□ -1.58
NPC1O15118 MTATP6P26-201ENST00000445926 662 ntBASIC5.16□□□□□ -1.58
NPC1O15118 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.16□□□□□ -1.58
NPC1O15118 MTCYBP11-201ENST00000447254 1109 ntBASIC5.16□□□□□ -1.58
NPC1O15118 EIF4A1P11-201ENST00000451239 222 ntBASIC5.16□□□□□ -1.58
NPC1O15118 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.16□□□□□ -1.58
NPC1O15118 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1O15118 GAPDHP56-201ENST00000506031 988 ntBASIC5.16□□□□□ -1.58
NPC1O15118 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.16□□□□□ -1.58
NPC1O15118 RNA5SP43-201ENST00000516559 110 ntBASIC5.16□□□□□ -1.58
NPC1O15118 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.16□□□□□ -1.58
NPC1O15118 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.16□□□□□ -1.58
NPC1O15118 AC021006.3-201ENST00000530771 192 ntBASIC5.16□□□□□ -1.58
NPC1O15118 AP001317.1-201ENST00000531194 960 ntBASIC5.16□□□□□ -1.58
NPC1O15118 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.16□□□□□ -1.58
NPC1O15118 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.16□□□□□ -1.58
NPC1O15118 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.16□□□□□ -1.58
NPC1O15118 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.16□□□□□ -1.58
NPC1O15118 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.16□□□□□ -1.58
NPC1O15118 AC018552.3-201ENST00000567416 561 ntBASIC5.16□□□□□ -1.58
NPC1O15118 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.16□□□□□ -1.58
NPC1O15118 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.16□□□□□ -1.58
NPC1O15118 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.16□□□□□ -1.58
NPC1O15118 VN1R83P-201ENST00000595685 445 ntBASIC5.16□□□□□ -1.58
NPC1O15118 AC105254.2-201ENST00000603636 436 ntBASIC5.16□□□□□ -1.58
NPC1O15118 AC011453.2-201ENST00000603737 729 ntBASIC5.16□□□□□ -1.58
NPC1O15118 AC087783.2-201ENST00000605070 562 ntBASIC5.16□□□□□ -1.58
NPC1O15118 AC107952.2-201ENST00000606048 486 ntBASIC5.16□□□□□ -1.58
NPC1O15118 AL031595.2-201ENST00000624215 19071 ntBASIC5.16□□□□□ -1.58
NPC1O15118 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1O15118 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1O15118 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.16□□□□□ -1.58
NPC1O15118 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NPC1O15118 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
NPC1O15118 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
NPC1O15118 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.16□□□□□ -1.58
NPC1O15118 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.16□□□□□ -1.58
NPC1O15118 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.15□□□□□ -1.58
NPC1O15118 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NPC1O15118 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
NPC1O15118 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
NPC1O15118 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NPC1O15118 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NPC1O15118 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NPC1O15118 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
NPC1O15118 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NPC1O15118 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NPC1O15118 RNU6-413P-201ENST00000384115 107 ntBASIC5.15□□□□□ -1.59
NPC1O15118 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
NPC1O15118 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
NPC1O15118 RNA5SP241-201ENST00000391326 114 ntBASIC5.15□□□□□ -1.59
NPC1O15118 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.15□□□□□ -1.59
NPC1O15118 AL356320.2-201ENST00000417263 507 ntBASIC5.15□□□□□ -1.59
NPC1O15118 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.15□□□□□ -1.59
NPC1O15118 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.15□□□□□ -1.59
NPC1O15118 AC007559.1-201ENST00000428736 355 ntBASIC5.15□□□□□ -1.59
NPC1O15118 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.15□□□□□ -1.59
NPC1O15118 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.15□□□□□ -1.59
NPC1O15118 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.15□□□□□ -1.59
NPC1O15118 AC004865.1-201ENST00000442276 1003 ntBASIC5.15□□□□□ -1.59
NPC1O15118 RPL34P20-201ENST00000442771 351 ntBASIC5.15□□□□□ -1.59
NPC1O15118 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.15□□□□□ -1.59
NPC1O15118 RPS27AP15-201ENST00000447672 466 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms