RNA–Protein interactions for RNA: ENST00000403720.2

SFR1P1-201, Transcript of SFR1 pseudogene 1, humanhuman

BASIC

Gene SFR1P1, Length 688 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1P1-201ENST00000403720 AEBP2Q6ZN18 517 aaPredicted RBP25.7■■□□□ 1.7
SFR1P1-201ENST00000403720 CHIC1Q5VXU3 224 aa24.84■■□□□ 1.57
SFR1P1-201ENST00000403720 SENP3Q9H4L4 574 aaPredicted RBP21.96■■□□□ 1.11
SFR1P1-201ENST00000403720 PHF23Q9BUL5 403 aaPredicted RBP21.77■■□□□ 1.08
SFR1P1-201ENST00000403720 FOXD1Q16676 465 aa20.36■□□□□ 0.85
SFR1P1-201ENST00000403720 PLPPR3Q6T4P5 718 aa20.08■□□□□ 0.81
SFR1P1-201ENST00000403720 ADRA2BP18089 450 aa19.33■□□□□ 0.68
SFR1P1-201ENST00000403720 PPP6R1Q9UPN7 881 aa19.32■□□□□ 0.68
SFR1P1-201ENST00000403720 PIAS4Q8N2W9 510 aaPredicted RBP19.19■□□□□ 0.66
SFR1P1-201ENST00000403720 POTEDQ86YR6 584 aa19.03■□□□□ 0.64
SFR1P1-201ENST00000403720 MSH5O43196 834 aa18.98■□□□□ 0.63
SFR1P1-201ENST00000403720 SCAF1Q9H7N4 1312 aaKnown RBP17.78■□□□□ 0.44
SFR1P1-201ENST00000403720 PPP4R3CPQ6ZMV5 832 aa17.64■□□□□ 0.41
SFR1P1-201ENST00000403720 MAPK8IP2Q13387 824 aaPredicted RBP17.62■□□□□ 0.41
SFR1P1-201ENST00000403720 DMRT2Q9Y5R5 561 aa17.45■□□□□ 0.38
SFR1P1-201ENST00000403720 CNKSR2Q8WXI2 1034 aa17.23■□□□□ 0.35
SFR1P1-201ENST00000403720 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
SFR1P1-201ENST00000403720 KCNA4P22459 653 aa17■□□□□ 0.31
SFR1P1-201ENST00000403720 RNF216Q9NWF9 866 aaPredicted RBP16.95■□□□□ 0.3
SFR1P1-201ENST00000403720 HOXD11P31277 338 aaPredicted RBP16.94■□□□□ 0.3
SFR1P1-201ENST00000403720 NPM3O75607 178 aaKnown RBP16.83■□□□□ 0.28
SFR1P1-201ENST00000403720 DCAF8L1A6NGE4 600 aa16.82■□□□□ 0.28
SFR1P1-201ENST00000403720 DNAJC5BQ9UF47 199 aa16.45■□□□□ 0.22
SFR1P1-201ENST00000403720 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.25■□□□□ 0.19
SFR1P1-201ENST00000403720 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.19
SFR1P1-201ENST00000403720 RNF39Q9H2S5 420 aa16.18■□□□□ 0.18
SFR1P1-201ENST00000403720 CACNB1Q02641 598 aaPredicted RBP16.08■□□□□ 0.16
SFR1P1-201ENST00000403720 C1QBPQ07021 282 aaKnown RBP16.01■□□□□ 0.15
SFR1P1-201ENST00000403720 SLC4A2P04920 1241 aa15.91■□□□□ 0.14
SFR1P1-201ENST00000403720 U3KPZ7 1027 aaPredicted RBP15.85■□□□□ 0.13
SFR1P1-201ENST00000403720 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
SFR1P1-201ENST00000403720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.65■□□□□ 0.1
SFR1P1-201ENST00000403720 HNRNPUL2Q1KMD3 747 aaKnown RBP15.65■□□□□ 0.1
SFR1P1-201ENST00000403720 MYCNP04198 464 aaPredicted RBP15.61■□□□□ 0.09
SFR1P1-201ENST00000403720 ZBTB22O15209 634 aa15.6■□□□□ 0.09
SFR1P1-201ENST00000403720 APLP2Q06481 763 aa15.59■□□□□ 0.09
SFR1P1-201ENST00000403720 CAPN15O75808 1086 aa15.55■□□□□ 0.08
SFR1P1-201ENST00000403720 SAMD1Q6SPF0 538 aaPredicted RBP15.55■□□□□ 0.08
SFR1P1-201ENST00000403720 EHMT2Q96KQ7 1210 aa15.55■□□□□ 0.08
SFR1P1-201ENST00000403720 SPINK5Q9NQ38 1064 aaPredicted RBP15.51■□□□□ 0.07
SFR1P1-201ENST00000403720 CSRNP3Q8WYN3 585 aa15.45■□□□□ 0.06
SFR1P1-201ENST00000403720 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
SFR1P1-201ENST00000403720 ZNF219Q9P2Y4 722 aaPredicted RBP15.37■□□□□ 0.05
SFR1P1-201ENST00000403720 DSG3P32926 999 aa15.29■□□□□ 0.04
SFR1P1-201ENST00000403720 ATXN8OSP0DMR3 200 aa15.25■□□□□ 0.03
SFR1P1-201ENST00000403720 ABCB7O75027 752 aa15.19■□□□□ 0.02
SFR1P1-201ENST00000403720 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
SFR1P1-201ENST00000403720 POLA2Q14181 598 aa15.05■□□□□ -0
SFR1P1-201ENST00000403720 ZBTB12Q9Y330 459 aaPredicted RBP14.81□□□□□ -0.04
SFR1P1-201ENST00000403720 POTEHQ6S545 545 aa14.77□□□□□ -0.05
SFR1P1-201ENST00000403720 RBM42Q9BTD8 480 aaKnown RBP14.65□□□□□ -0.06
SFR1P1-201ENST00000403720 FBLN2P98095 1184 aa14.63□□□□□ -0.07
SFR1P1-201ENST00000403720 OSCARQ8IYS5 282 aa14.52□□□□□ -0.09
SFR1P1-201ENST00000403720 MKRN4PQ13434 485 aaPredicted RBP14.45□□□□□ -0.1
SFR1P1-201ENST00000403720 AKT1S1Q96B36 256 aa14.37□□□□□ -0.11
SFR1P1-201ENST00000403720 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
SFR1P1-201ENST00000403720 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
SFR1P1-201ENST00000403720 SPDYE2Q495Y8 402 aa14.35□□□□□ -0.11
SFR1P1-201ENST00000403720 ZNF692Q9BU19 519 aaPredicted RBP14.27□□□□□ -0.13
SFR1P1-201ENST00000403720 REM2Q8IYK8 340 aaPredicted RBP14.22□□□□□ -0.13
SFR1P1-201ENST00000403720 SSUH2Q9Y2M2 353 aa14.15□□□□□ -0.14
SFR1P1-201ENST00000403720 CHRDL2Q6WN34 429 aa14.14□□□□□ -0.15
SFR1P1-201ENST00000403720 SPDYE4A6NLX3 237 aa14.12□□□□□ -0.15
SFR1P1-201ENST00000403720 PABPN1Q86U42 306 aaKnown RBP eCLIP14.05□□□□□ -0.16
SFR1P1-201ENST00000403720 PITPNM1O00562 1244 aa14.04□□□□□ -0.16
SFR1P1-201ENST00000403720 SPDYE1Q8NFV5 336 aaPredicted RBP14.02□□□□□ -0.17
SFR1P1-201ENST00000403720 CLEC11AQ9Y240 323 aa14.01□□□□□ -0.17
SFR1P1-201ENST00000403720 FKBP8Q14318 412 aa13.99□□□□□ -0.17
SFR1P1-201ENST00000403720 PROM2Q8N271 834 aa13.87□□□□□ -0.19
SFR1P1-201ENST00000403720 PIP4P2Q8N4L2 257 aa13.87□□□□□ -0.19
SFR1P1-201ENST00000403720 PRR29P0C7W0 189 aa13.83□□□□□ -0.2
SFR1P1-201ENST00000403720 FXR2P51116 673 aaKnown RBP eCLIP13.83□□□□□ -0.2
SFR1P1-201ENST00000403720 STAG3Q9UJ98 1225 aa13.8□□□□□ -0.2
SFR1P1-201ENST00000403720 PRKAR2AP13861 404 aaKnown RBP13.73□□□□□ -0.21
SFR1P1-201ENST00000403720 CHADLQ6NUI6 762 aa13.63□□□□□ -0.23
SFR1P1-201ENST00000403720 FBXO3Q9UK99 471 aa13.62□□□□□ -0.23
SFR1P1-201ENST00000403720 HAX1O00165 279 aa13.58□□□□□ -0.24
SFR1P1-201ENST00000403720 SP7Q8TDD2 431 aaPredicted RBP13.51□□□□□ -0.25
SFR1P1-201ENST00000403720 CREBZFQ9NS37 354 aa13.49□□□□□ -0.25
SFR1P1-201ENST00000403720 FARP1Q9Y4F1 1045 aaPredicted RBP13.48□□□□□ -0.25
SFR1P1-201ENST00000403720 PLEKHG5O94827 1062 aa13.44□□□□□ -0.26
SFR1P1-201ENST00000403720 MIER1Q8N108 512 aa13.42□□□□□ -0.26
SFR1P1-201ENST00000403720 PLCD3Q8N3E9 789 aa13.39□□□□□ -0.27
SFR1P1-201ENST00000403720 C19orf67A6NJJ6 358 aa13.38□□□□□ -0.27
SFR1P1-201ENST00000403720 VASPP50552 380 aaPredicted RBP13.37□□□□□ -0.27
SFR1P1-201ENST00000403720 NPM1P06748 294 aaKnown RBP eCLIP13.36□□□□□ -0.27
SFR1P1-201ENST00000403720 CD44P16070 742 aaKnown RBP13.32□□□□□ -0.28
SFR1P1-201ENST00000403720 EVX2Q03828 476 aa13.32□□□□□ -0.28
SFR1P1-201ENST00000403720 ZBTB47Q9UFB7 747 aaPredicted RBP13.32□□□□□ -0.28
SFR1P1-201ENST00000403720 MNX1P50219 401 aaPredicted RBP13.27□□□□□ -0.29
SFR1P1-201ENST00000403720 PAK3O75914 559 aaPredicted RBP13.24□□□□□ -0.29
SFR1P1-201ENST00000403720 ZRANB1Q9UGI0 708 aa13.21□□□□□ -0.29
SFR1P1-201ENST00000403720 KLHL34Q8N239 644 aa13.19□□□□□ -0.3
SFR1P1-201ENST00000403720 IFNLR1Q8IU57 520 aaPredicted RBP13.15□□□□□ -0.3
SFR1P1-201ENST00000403720 GABBR2O75899 941 aa13.1□□□□□ -0.31
SFR1P1-201ENST00000403720 TSPYL2Q9H2G4 693 aaPredicted RBP13.1□□□□□ -0.31
SFR1P1-201ENST00000403720 CLCN6P51797 869 aa13.09□□□□□ -0.31
SFR1P1-201ENST00000403720 ZNF579Q8NAF0 562 aaKnown RBP13.09□□□□□ -0.31
SFR1P1-201ENST00000403720 SPOCK2Q92563 424 aa13.07□□□□□ -0.32
SFR1P1-201ENST00000403720 NUBP1P53384 320 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms