RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 AEBP2Q6ZN18 517 aaPredicted RBP25.7■■□□□ 1.7
SOX2-OT-207ENST00000476964 CHIC1Q5VXU3 224 aa25.04■■□□□ 1.6
SOX2-OT-207ENST00000476964 PHF23Q9BUL5 403 aaPredicted RBP22.05■■□□□ 1.12
SOX2-OT-207ENST00000476964 SENP3Q9H4L4 574 aaPredicted RBP21.78■■□□□ 1.08
SOX2-OT-207ENST00000476964 PLPPR3Q6T4P5 718 aa20.28■□□□□ 0.84
SOX2-OT-207ENST00000476964 FOXD1Q16676 465 aa20.24■□□□□ 0.83
SOX2-OT-207ENST00000476964 PPP6R1Q9UPN7 881 aa19.47■□□□□ 0.71
SOX2-OT-207ENST00000476964 ADRA2BP18089 450 aa19.39■□□□□ 0.69
SOX2-OT-207ENST00000476964 PIAS4Q8N2W9 510 aaPredicted RBP19.01■□□□□ 0.63
SOX2-OT-207ENST00000476964 MSH5O43196 834 aa18.67■□□□□ 0.58
SOX2-OT-207ENST00000476964 PPP4R3CPQ6ZMV5 832 aa17.86■□□□□ 0.45
SOX2-OT-207ENST00000476964 SCAF1Q9H7N4 1312 aaKnown RBP17.73■□□□□ 0.43
SOX2-OT-207ENST00000476964 MAPK8IP2Q13387 824 aaPredicted RBP17.62■□□□□ 0.41
SOX2-OT-207ENST00000476964 DMRT2Q9Y5R5 561 aa17.4■□□□□ 0.38
SOX2-OT-207ENST00000476964 CNKSR2Q8WXI2 1034 aa17.39■□□□□ 0.37
SOX2-OT-207ENST00000476964 KCNA4P22459 653 aa17.38■□□□□ 0.37
SOX2-OT-207ENST00000476964 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
SOX2-OT-207ENST00000476964 NPM3O75607 178 aaKnown RBP17.13■□□□□ 0.33
SOX2-OT-207ENST00000476964 POTEDQ86YR6 584 aa17.11■□□□□ 0.33
SOX2-OT-207ENST00000476964 RNF216Q9NWF9 866 aaPredicted RBP17.08■□□□□ 0.32
SOX2-OT-207ENST00000476964 HOXD11P31277 338 aaPredicted RBP17.05■□□□□ 0.32
SOX2-OT-207ENST00000476964 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
SOX2-OT-207ENST00000476964 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
SOX2-OT-207ENST00000476964 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
SOX2-OT-207ENST00000476964 SLC4A2P04920 1241 aa16.23■□□□□ 0.19
SOX2-OT-207ENST00000476964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.14■□□□□ 0.17
SOX2-OT-207ENST00000476964 RNF39Q9H2S5 420 aa16.03■□□□□ 0.16
SOX2-OT-207ENST00000476964 ZBTB22O15209 634 aa16.02■□□□□ 0.16
SOX2-OT-207ENST00000476964 FOXD4L1Q9NU39 408 aa15.99■□□□□ 0.15
SOX2-OT-207ENST00000476964 U3KPZ7 1027 aaPredicted RBP15.93■□□□□ 0.14
SOX2-OT-207ENST00000476964 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
SOX2-OT-207ENST00000476964 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
SOX2-OT-207ENST00000476964 C1QBPQ07021 282 aaKnown RBP15.82■□□□□ 0.12
SOX2-OT-207ENST00000476964 MYCNP04198 464 aaPredicted RBP15.81■□□□□ 0.12
SOX2-OT-207ENST00000476964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.69■□□□□ 0.1
SOX2-OT-207ENST00000476964 HNRNPUL2Q1KMD3 747 aaKnown RBP15.69■□□□□ 0.1
SOX2-OT-207ENST00000476964 SAMD1Q6SPF0 538 aaPredicted RBP15.63■□□□□ 0.09
SOX2-OT-207ENST00000476964 CACNB1Q02641 598 aaPredicted RBP15.57■□□□□ 0.08
SOX2-OT-207ENST00000476964 ATXN8OSP0DMR3 200 aa15.51■□□□□ 0.07
SOX2-OT-207ENST00000476964 APLP2Q06481 763 aa15.51■□□□□ 0.07
SOX2-OT-207ENST00000476964 SPINK5Q9NQ38 1064 aaPredicted RBP15.48■□□□□ 0.07
SOX2-OT-207ENST00000476964 ATF5Q9Y2D1 282 aaPredicted RBP15.43■□□□□ 0.06
SOX2-OT-207ENST00000476964 CAPN15O75808 1086 aa15.36■□□□□ 0.05
SOX2-OT-207ENST00000476964 ZNF219Q9P2Y4 722 aaPredicted RBP15.32■□□□□ 0.04
SOX2-OT-207ENST00000476964 TRHP20396 242 aaPredicted RBP15.29■□□□□ 0.04
SOX2-OT-207ENST00000476964 DSG3P32926 999 aa15.22■□□□□ 0.03
SOX2-OT-207ENST00000476964 POLA2Q14181 598 aa15.09■□□□□ 0.01
SOX2-OT-207ENST00000476964 ABCB7O75027 752 aa15.07■□□□□ 0
SOX2-OT-207ENST00000476964 ZBTB12Q9Y330 459 aaPredicted RBP14.82□□□□□ -0.04
SOX2-OT-207ENST00000476964 MKRN4PQ13434 485 aaPredicted RBP14.76□□□□□ -0.05
SOX2-OT-207ENST00000476964 FBLN2P98095 1184 aa14.7□□□□□ -0.06
SOX2-OT-207ENST00000476964 OSCARQ8IYS5 282 aa14.52□□□□□ -0.09
SOX2-OT-207ENST00000476964 RBM42Q9BTD8 480 aaKnown RBP14.45□□□□□ -0.1
SOX2-OT-207ENST00000476964 SPDYE2BA6NHP3 402 aa14.43□□□□□ -0.1
SOX2-OT-207ENST00000476964 SPDYE6P0CI01 402 aa14.43□□□□□ -0.1
SOX2-OT-207ENST00000476964 SPDYE2Q495Y8 402 aa14.43□□□□□ -0.1
SOX2-OT-207ENST00000476964 SSUH2Q9Y2M2 353 aa14.35□□□□□ -0.11
SOX2-OT-207ENST00000476964 SPDYE4A6NLX3 237 aa14.34□□□□□ -0.11
SOX2-OT-207ENST00000476964 ZNF692Q9BU19 519 aaPredicted RBP14.34□□□□□ -0.11
SOX2-OT-207ENST00000476964 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
SOX2-OT-207ENST00000476964 FKBP8Q14318 412 aa14.27□□□□□ -0.13
SOX2-OT-207ENST00000476964 PROM2Q8N271 834 aa14.21□□□□□ -0.13
SOX2-OT-207ENST00000476964 REM2Q8IYK8 340 aaPredicted RBP14.16□□□□□ -0.14
SOX2-OT-207ENST00000476964 PABPN1Q86U42 306 aaKnown RBP eCLIP14.14□□□□□ -0.15
SOX2-OT-207ENST00000476964 SPDYE1Q8NFV5 336 aaPredicted RBP14□□□□□ -0.17
SOX2-OT-207ENST00000476964 PITPNM1O00562 1244 aa13.98□□□□□ -0.17
SOX2-OT-207ENST00000476964 STAG3Q9UJ98 1225 aa13.92□□□□□ -0.18
SOX2-OT-207ENST00000476964 CHRDL2Q6WN34 429 aa13.89□□□□□ -0.19
SOX2-OT-207ENST00000476964 CLEC11AQ9Y240 323 aa13.88□□□□□ -0.19
SOX2-OT-207ENST00000476964 FBXO3Q9UK99 471 aa13.82□□□□□ -0.2
SOX2-OT-207ENST00000476964 PRR29P0C7W0 189 aa13.79□□□□□ -0.2
SOX2-OT-207ENST00000476964 FXR2P51116 673 aaKnown RBP eCLIP13.78□□□□□ -0.2
SOX2-OT-207ENST00000476964 PIP4P2Q8N4L2 257 aa13.71□□□□□ -0.21
SOX2-OT-207ENST00000476964 CREBZFQ9NS37 354 aa13.65□□□□□ -0.22
SOX2-OT-207ENST00000476964 VASPP50552 380 aaPredicted RBP13.63□□□□□ -0.23
SOX2-OT-207ENST00000476964 PRKAR2AP13861 404 aaKnown RBP13.61□□□□□ -0.23
SOX2-OT-207ENST00000476964 MIER1Q8N108 512 aa13.6□□□□□ -0.23
SOX2-OT-207ENST00000476964 CHADLQ6NUI6 762 aa13.58□□□□□ -0.24
SOX2-OT-207ENST00000476964 MNX1P50219 401 aaPredicted RBP13.56□□□□□ -0.24
SOX2-OT-207ENST00000476964 POTEHQ6S545 545 aa13.53□□□□□ -0.24
SOX2-OT-207ENST00000476964 PLCD3Q8N3E9 789 aa13.53□□□□□ -0.24
SOX2-OT-207ENST00000476964 FARP1Q9Y4F1 1045 aaPredicted RBP13.49□□□□□ -0.25
SOX2-OT-207ENST00000476964 PLEKHG5O94827 1062 aa13.48□□□□□ -0.25
SOX2-OT-207ENST00000476964 IFNLR1Q8IU57 520 aaPredicted RBP13.47□□□□□ -0.25
SOX2-OT-207ENST00000476964 ZBTB47Q9UFB7 747 aaPredicted RBP13.43□□□□□ -0.26
SOX2-OT-207ENST00000476964 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
SOX2-OT-207ENST00000476964 KLHL34Q8N239 644 aa13.35□□□□□ -0.27
SOX2-OT-207ENST00000476964 NUBP1P53384 320 aa13.32□□□□□ -0.28
SOX2-OT-207ENST00000476964 C19orf67A6NJJ6 358 aa13.3□□□□□ -0.28
SOX2-OT-207ENST00000476964 SPOCK2Q92563 424 aa13.28□□□□□ -0.28
SOX2-OT-207ENST00000476964 HAX1O00165 279 aa13.24□□□□□ -0.29
SOX2-OT-207ENST00000476964 RASEFQ8IZ41 740 aa13.24□□□□□ -0.29
SOX2-OT-207ENST00000476964 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-207ENST00000476964 EVX2Q03828 476 aa13.2□□□□□ -0.3
SOX2-OT-207ENST00000476964 FAM212AQ96EL1 285 aa13.13□□□□□ -0.31
SOX2-OT-207ENST00000476964 PAK3O75914 559 aaPredicted RBP13.12□□□□□ -0.31
SOX2-OT-207ENST00000476964 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
SOX2-OT-207ENST00000476964 GSE1Q14687 1217 aa13.11□□□□□ -0.31
SOX2-OT-207ENST00000476964 ZRANB1Q9UGI0 708 aa13.11□□□□□ -0.31
SOX2-OT-207ENST00000476964 CCDC61Q9Y6R9 512 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 561.3 ms