RNA–Protein interactions for RNA: ENST00000435391.4

NANOGP2-201, Transcript of Nanog homeobox pseudogene 2, humanhuman

BASIC

Gene NANOGP2, Length 727 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP2-201ENST00000435391 AEBP2Q6ZN18 517 aaPredicted RBP24.81■■□□□ 1.56
NANOGP2-201ENST00000435391 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.37
NANOGP2-201ENST00000435391 SENP3Q9H4L4 574 aaPredicted RBP21.36■■□□□ 1.01
NANOGP2-201ENST00000435391 PHF23Q9BUL5 403 aaPredicted RBP20.96■□□□□ 0.95
NANOGP2-201ENST00000435391 FOXD1Q16676 465 aa19.79■□□□□ 0.76
NANOGP2-201ENST00000435391 PLPPR3Q6T4P5 718 aa18.87■□□□□ 0.61
NANOGP2-201ENST00000435391 MSH5O43196 834 aa18.7■□□□□ 0.58
NANOGP2-201ENST00000435391 PIAS4Q8N2W9 510 aaPredicted RBP18.55■□□□□ 0.56
NANOGP2-201ENST00000435391 PPP6R1Q9UPN7 881 aa18.36■□□□□ 0.53
NANOGP2-201ENST00000435391 ADRA2BP18089 450 aa18.33■□□□□ 0.52
NANOGP2-201ENST00000435391 POTEDQ86YR6 584 aa18.27■□□□□ 0.52
NANOGP2-201ENST00000435391 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
NANOGP2-201ENST00000435391 DMRT2Q9Y5R5 561 aa16.88■□□□□ 0.29
NANOGP2-201ENST00000435391 MAPK8IP2Q13387 824 aaPredicted RBP16.82■□□□□ 0.28
NANOGP2-201ENST00000435391 PPP4R3CPQ6ZMV5 832 aa16.46■□□□□ 0.23
NANOGP2-201ENST00000435391 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
NANOGP2-201ENST00000435391 CNKSR2Q8WXI2 1034 aa16.22■□□□□ 0.19
NANOGP2-201ENST00000435391 DCAF8L1A6NGE4 600 aa16.19■□□□□ 0.18
NANOGP2-201ENST00000435391 RNF216Q9NWF9 866 aaPredicted RBP16.1■□□□□ 0.17
NANOGP2-201ENST00000435391 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
NANOGP2-201ENST00000435391 KCNA4P22459 653 aa15.98■□□□□ 0.15
NANOGP2-201ENST00000435391 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
NANOGP2-201ENST00000435391 RNF39Q9H2S5 420 aa15.87■□□□□ 0.13
NANOGP2-201ENST00000435391 DNAJC5BQ9UF47 199 aa15.76■□□□□ 0.11
NANOGP2-201ENST00000435391 C1QBPQ07021 282 aaKnown RBP15.7■□□□□ 0.1
NANOGP2-201ENST00000435391 NPM3O75607 178 aaKnown RBP15.6■□□□□ 0.09
NANOGP2-201ENST00000435391 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.48■□□□□ 0.07
NANOGP2-201ENST00000435391 SLC4A1APQ9BWU0 796 aaKnown RBP15.3■□□□□ 0.04
NANOGP2-201ENST00000435391 U3KPZ7 1027 aaPredicted RBP15.08■□□□□ 0
NANOGP2-201ENST00000435391 EHMT2Q96KQ7 1210 aa15.01□□□□□ -0.01
NANOGP2-201ENST00000435391 CAPN15O75808 1086 aa14.92□□□□□ -0.02
NANOGP2-201ENST00000435391 APLP2Q06481 763 aa14.87□□□□□ -0.03
NANOGP2-201ENST00000435391 SPINK5Q9NQ38 1064 aaPredicted RBP14.85□□□□□ -0.03
NANOGP2-201ENST00000435391 SLC4A2P04920 1241 aa14.83□□□□□ -0.04
NANOGP2-201ENST00000435391 DSG3P32926 999 aa14.81□□□□□ -0.04
NANOGP2-201ENST00000435391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
NANOGP2-201ENST00000435391 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
NANOGP2-201ENST00000435391 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
NANOGP2-201ENST00000435391 FOXD4L1Q9NU39 408 aa14.72□□□□□ -0.05
NANOGP2-201ENST00000435391 ZNF219Q9P2Y4 722 aaPredicted RBP14.71□□□□□ -0.05
NANOGP2-201ENST00000435391 SAMD1Q6SPF0 538 aaPredicted RBP14.67□□□□□ -0.06
NANOGP2-201ENST00000435391 ZBTB22O15209 634 aa14.65□□□□□ -0.06
NANOGP2-201ENST00000435391 TRHP20396 242 aaPredicted RBP14.63□□□□□ -0.07
NANOGP2-201ENST00000435391 ABCB7O75027 752 aa14.5□□□□□ -0.09
NANOGP2-201ENST00000435391 MYCNP04198 464 aaPredicted RBP14.48□□□□□ -0.09
NANOGP2-201ENST00000435391 POTEHQ6S545 545 aa14.33□□□□□ -0.12
NANOGP2-201ENST00000435391 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
NANOGP2-201ENST00000435391 POLA2Q14181 598 aa14.21□□□□□ -0.13
NANOGP2-201ENST00000435391 ATXN8OSP0DMR3 200 aa14.19□□□□□ -0.14
NANOGP2-201ENST00000435391 ZBTB12Q9Y330 459 aaPredicted RBP14.09□□□□□ -0.15
NANOGP2-201ENST00000435391 ATF5Q9Y2D1 282 aaPredicted RBP13.98□□□□□ -0.17
NANOGP2-201ENST00000435391 CHRDL2Q6WN34 429 aa13.9□□□□□ -0.18
NANOGP2-201ENST00000435391 AKT1S1Q96B36 256 aa13.87□□□□□ -0.19
NANOGP2-201ENST00000435391 OSCARQ8IYS5 282 aa13.77□□□□□ -0.21
NANOGP2-201ENST00000435391 REM2Q8IYK8 340 aaPredicted RBP13.67□□□□□ -0.22
NANOGP2-201ENST00000435391 FBLN2P98095 1184 aa13.65□□□□□ -0.22
NANOGP2-201ENST00000435391 SPDYE2BA6NHP3 402 aa13.56□□□□□ -0.24
NANOGP2-201ENST00000435391 SPDYE6P0CI01 402 aa13.56□□□□□ -0.24
NANOGP2-201ENST00000435391 SPDYE2Q495Y8 402 aa13.56□□□□□ -0.24
NANOGP2-201ENST00000435391 PITPNM1O00562 1244 aa13.53□□□□□ -0.24
NANOGP2-201ENST00000435391 PIP4P2Q8N4L2 257 aa13.51□□□□□ -0.25
NANOGP2-201ENST00000435391 FXR2P51116 673 aaKnown RBP eCLIP13.43□□□□□ -0.26
NANOGP2-201ENST00000435391 SP7Q8TDD2 431 aaPredicted RBP13.42□□□□□ -0.26
NANOGP2-201ENST00000435391 MKRN4PQ13434 485 aaPredicted RBP13.38□□□□□ -0.27
NANOGP2-201ENST00000435391 FKBP8Q14318 412 aa13.36□□□□□ -0.27
NANOGP2-201ENST00000435391 SPDYE1Q8NFV5 336 aaPredicted RBP13.35□□□□□ -0.27
NANOGP2-201ENST00000435391 ZNF692Q9BU19 519 aaPredicted RBP13.34□□□□□ -0.27
NANOGP2-201ENST00000435391 HAX1O00165 279 aa13.33□□□□□ -0.28
NANOGP2-201ENST00000435391 SSUH2Q9Y2M2 353 aa13.33□□□□□ -0.28
NANOGP2-201ENST00000435391 CLEC11AQ9Y240 323 aa13.27□□□□□ -0.29
NANOGP2-201ENST00000435391 SPDYE4A6NLX3 237 aa13.22□□□□□ -0.29
NANOGP2-201ENST00000435391 PRKAR2AP13861 404 aaKnown RBP13.2□□□□□ -0.3
NANOGP2-201ENST00000435391 PABPN1Q86U42 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
NANOGP2-201ENST00000435391 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
NANOGP2-201ENST00000435391 C19orf67A6NJJ6 358 aa13.01□□□□□ -0.33
NANOGP2-201ENST00000435391 EVX2Q03828 476 aa13.01□□□□□ -0.33
NANOGP2-201ENST00000435391 CHADLQ6NUI6 762 aa12.96□□□□□ -0.33
NANOGP2-201ENST00000435391 PROM2Q8N271 834 aa12.93□□□□□ -0.34
NANOGP2-201ENST00000435391 FBXO3Q9UK99 471 aa12.9□□□□□ -0.34
NANOGP2-201ENST00000435391 STAG3Q9UJ98 1225 aa12.85□□□□□ -0.35
NANOGP2-201ENST00000435391 FARP1Q9Y4F1 1045 aaPredicted RBP12.83□□□□□ -0.36
NANOGP2-201ENST00000435391 GABBR2O75899 941 aa12.81□□□□□ -0.36
NANOGP2-201ENST00000435391 CD44P16070 742 aaKnown RBP12.8□□□□□ -0.36
NANOGP2-201ENST00000435391 CLCN6P51797 869 aa12.76□□□□□ -0.37
NANOGP2-201ENST00000435391 VASPP50552 380 aaPredicted RBP12.65□□□□□ -0.38
NANOGP2-201ENST00000435391 CREBZFQ9NS37 354 aa12.65□□□□□ -0.38
NANOGP2-201ENST00000435391 ZNF579Q8NAF0 562 aaKnown RBP12.61□□□□□ -0.39
NANOGP2-201ENST00000435391 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
NANOGP2-201ENST00000435391 PLCD3Q8N3E9 789 aa12.58□□□□□ -0.4
NANOGP2-201ENST00000435391 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
NANOGP2-201ENST00000435391 PLEKHG5O94827 1062 aa12.57□□□□□ -0.4
NANOGP2-201ENST00000435391 MIER1Q8N108 512 aa12.57□□□□□ -0.4
NANOGP2-201ENST00000435391 LHX8Q68G74 356 aa12.56□□□□□ -0.4
NANOGP2-201ENST00000435391 NPM1P06748 294 aaKnown RBP eCLIP12.55□□□□□ -0.4
NANOGP2-201ENST00000435391 DCBLD2Q96PD2 775 aa12.53□□□□□ -0.4
NANOGP2-201ENST00000435391 KLHL34Q8N239 644 aa12.5□□□□□ -0.41
NANOGP2-201ENST00000435391 POTEIP0CG38 1075 aa12.48□□□□□ -0.41
NANOGP2-201ENST00000435391 IFNLR1Q8IU57 520 aaPredicted RBP12.47□□□□□ -0.41
NANOGP2-201ENST00000435391 ZBTB47Q9UFB7 747 aaPredicted RBP12.45□□□□□ -0.42
NANOGP2-201ENST00000435391 AMER1Q5JTC6 1135 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms