Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ZNF252P-205ENST00000528392 599 ntTSL 4 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 GS1-24F4.2-202ENST00000531701 380 ntTSL 3 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 PROSER3-207ENST00000537459 772 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 AC011602.1-201ENST00000546484 331 ntBASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 LINC02403-201ENST00000548215 484 ntTSL 3 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 HP-207ENST00000562526 685 ntTSL 3 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 RN7SL624P-201ENST00000580297 278 ntBASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 RN7SL322P-201ENST00000583519 299 ntBASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 ELOCP29-201ENST00000588193 334 ntBASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 AC073657.1-201ENST00000607504 316 ntTSL 3 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 AC006262.4-201ENST00000613498 286 ntBASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 AC018692.3-201ENST00000623929 123 ntBASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 SNORD98-201ENST00000636377 67 ntBASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 EPM2A-229ENST00000640980 647 ntTSL 3 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 NTPCR-201ENST00000366627 1762 ntTSL 3 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 TRIM32-201ENST00000373983 3688 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 PC-203ENST00000393960 4192 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 KLHL3-201ENST00000309755 6806 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 AEBP2-202ENST00000360995 2533 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 CCNK-201ENST00000389879 3524 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 STEAP3-203ENST00000393110 4262 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 TTC28-201ENST00000397906 11795 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 CAPRIN1-201ENST00000341394 4108 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 AL133279.3-201ENST00000563140 2352 ntBASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 RNF41-201ENST00000345093 5596 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 NOP2-202ENST00000382421 2736 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 GMEB1-203ENST00000373816 6410 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 PCNX2-205ENST00000430153 1982 ntTSL 5 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 BX005214.3-201ENST00000615174 1988 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 AL353770.3-201ENST00000616253 1988 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 ATG16L1-204ENST00000392018 3313 ntTSL 5 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 ANGPT4-201ENST00000381922 4676 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 TWISTNB-201ENST00000222567 3942 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 NAP1L3-202ENST00000475430 2555 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 SRPK2-202ENST00000393651 3650 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 ABCB4-206ENST00000453593 3699 ntTSL 5 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 NRP1-201ENST00000265371 5882 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 CYFIP1-203ENST00000610365 4515 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 ATP12A-202ENST00000381946 4258 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 AC240565.2-201ENST00000623180 2096 ntTSL 5 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 ETV6-202ENST00000396373 5989 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 ARHGAP25-202ENST00000409202 2945 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 FZD6-201ENST00000358755 3788 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 TRIM39-202ENST00000376659 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
KRTAP3-3Q9BYR6 RNF2-202ENST00000367510 3606 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 SMAP2-205ENST00000539317 2501 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 SCMH1-204ENST00000361705 3115 ntTSL 5 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 VIPR1-AS1-201ENST00000452639 1435 ntTSL 5 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 THSD7A-202ENST00000423059 10663 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 MAGED1-204ENST00000375772 2701 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 RASGRP1-213ENST00000561180 2707 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 CD46-209ENST00000367047 3089 ntTSL 5 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 NFASC-207ENST00000404907 5447 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 SMARCC2-209ENST00000550164 4114 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 SRP19-204ENST00000505459 2841 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 UBQLN2-201ENST00000338222 4230 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AC092692.1-201ENST00000623625 2595 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 RNF185-201ENST00000266252 2946 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 RSBN1L-203ENST00000445288 2667 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 SNORD115-19-201ENST00000363098 82 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 SNORD115-18-201ENST00000363293 82 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 RN7SKP180-201ENST00000363913 330 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 Y_RNA.796-201ENST00000364268 102 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 SNORD115-17-201ENST00000364612 82 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 Y_RNA.799-201ENST00000364992 102 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 SNORD24-201ENST00000383884 75 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 SNORD61-201ENST00000384252 73 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 U8.12-201ENST00000384701 133 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 MIR548B-201ENST00000385247 97 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 IGLV3-25-201ENST00000390305 380 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 IGLV2-11-201ENST00000390314 400 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AL139095.2-201ENST00000407940 730 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 Z98751.1-201ENST00000413827 381 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 CYP4F29P-201ENST00000420685 446 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 AL133387.1-201ENST00000442188 382 ntTSL 3 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 ESR1-208ENST00000443427 6357 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 PAX8-AS1-208ENST00000456685 1207 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 RN7SL55P-201ENST00000464534 297 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 RN7SL634P-201ENST00000485467 292 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 RN7SL625P-201ENST00000488637 291 ntBASIC4.99□□□□□ -1.61
KRTAP3-3Q9BYR6 RN7SL309P-201ENST00000491364 286 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms