RNA–Protein interactions for RNA: ENST00000381946.4

ATP12A-202, Transcript of ATPase H+/K+ transporting non-gastric alpha2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP12A, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP12A-202ENST00000381946 NISCHQ9Y2I1 1504 aa20.31■□□□□ 0.84
ATP12A-202ENST00000381946 DCAF8L2P0C7V8 631 aa19.16■□□□□ 0.66
ATP12A-202ENST00000381946 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
ATP12A-202ENST00000381946 SUPT5HO00267 1087 aaKnown RBP18.32■□□□□ 0.52
ATP12A-202ENST00000381946 EHMT2Q96KQ7 1210 aa17.61■□□□□ 0.41
ATP12A-202ENST00000381946 FAM9AQ8IZU1 332 aaPredicted RBP17.22■□□□□ 0.35
ATP12A-202ENST00000381946 CCDC180Q9P1Z9 1646 aa17.16■□□□□ 0.34
ATP12A-202ENST00000381946 ABCC9O60706 1549 aa17.1■□□□□ 0.33
ATP12A-202ENST00000381946 ZCCHC6Q5VYS8 1495 aaKnown RBP17.01■□□□□ 0.31
ATP12A-202ENST00000381946 TTBK1Q5TCY1 1321 aaPredicted RBP16.87■□□□□ 0.29
ATP12A-202ENST00000381946 PABPN1Q86U42 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
ATP12A-202ENST00000381946 TRIM41Q8WV44 630 aa16.77■□□□□ 0.27
ATP12A-202ENST00000381946 LOC105371045A0A1W2PR82 267 aa16.76■□□□□ 0.27
ATP12A-202ENST00000381946 RANGAP1P46060 587 aaPredicted RBP16.74■□□□□ 0.27
ATP12A-202ENST00000381946 CHIC1Q5VXU3 224 aa16.74■□□□□ 0.27
ATP12A-202ENST00000381946 PCGF6Q9BYE7 350 aa16.73■□□□□ 0.27
ATP12A-202ENST00000381946 PPARGC1BQ86YN6 1023 aaKnown RBP16.67■□□□□ 0.26
ATP12A-202ENST00000381946 SCRIBQ14160 1630 aa16.46■□□□□ 0.23
ATP12A-202ENST00000381946 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
ATP12A-202ENST00000381946 UBTFP17480 764 aaKnown RBP16.35■□□□□ 0.21
ATP12A-202ENST00000381946 NACADO15069 1562 aa16.17■□□□□ 0.18
ATP12A-202ENST00000381946 ATP1B4Q9UN42 357 aaPredicted RBP16.16■□□□□ 0.18
ATP12A-202ENST00000381946 APLP2Q06481 763 aa16.12■□□□□ 0.17
ATP12A-202ENST00000381946 RB1CC1Q8TDY2 1594 aa16.07■□□□□ 0.16
ATP12A-202ENST00000381946 MYO15BQ96JP2 1530 aa16.06■□□□□ 0.16
ATP12A-202ENST00000381946 RSF1Q96T23 1441 aaPredicted RBP16.05■□□□□ 0.16
ATP12A-202ENST00000381946 CECR2Q9BXF3 1484 aa16.01■□□□□ 0.15
ATP12A-202ENST00000381946 CCER1Q8TC90 406 aaPredicted RBP15.96■□□□□ 0.15
ATP12A-202ENST00000381946 TRIM26Q12899 539 aaPredicted RBP15.92■□□□□ 0.14
ATP12A-202ENST00000381946 ITGAEP38570 1179 aa15.89■□□□□ 0.13
ATP12A-202ENST00000381946 HNRNPUL2Q1KMD3 747 aaKnown RBP15.85■□□□□ 0.13
ATP12A-202ENST00000381946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.83■□□□□ 0.12
ATP12A-202ENST00000381946 HRCP23327 699 aa15.82■□□□□ 0.12
ATP12A-202ENST00000381946 MROH2BQ7Z745 1585 aa15.78■□□□□ 0.12
ATP12A-202ENST00000381946 BAZ1AQ9NRL2 1556 aaPredicted RBP15.7■□□□□ 0.1
ATP12A-202ENST00000381946 P3H3Q8IVL6 736 aa15.69■□□□□ 0.1
ATP12A-202ENST00000381946 CSRNP3Q8WYN3 585 aa15.69■□□□□ 0.1
ATP12A-202ENST00000381946 WIZO95785 1651 aa15.63■□□□□ 0.09
ATP12A-202ENST00000381946 ARID3CA6NKF2 412 aa15.62■□□□□ 0.09
ATP12A-202ENST00000381946 YTHDC1Q96MU7 727 aaKnown RBP15.51■□□□□ 0.07
ATP12A-202ENST00000381946 FBLN2P98095 1184 aa15.51■□□□□ 0.07
ATP12A-202ENST00000381946 ZEB1P37275 1124 aaPredicted RBP15.47■□□□□ 0.07
ATP12A-202ENST00000381946 ABCC8Q09428 1581 aa15.46■□□□□ 0.07
ATP12A-202ENST00000381946 SMARCA4P51532 1647 aa15.46■□□□□ 0.07
ATP12A-202ENST00000381946 CCDC88BA6NC98 1476 aa15.45■□□□□ 0.06
ATP12A-202ENST00000381946 SOGA1O94964 1423 aa15.43■□□□□ 0.06
ATP12A-202ENST00000381946 FAM50AQ14320 339 aaKnown RBP15.43■□□□□ 0.06
ATP12A-202ENST00000381946 BAZ1BQ9UIG0 1483 aaKnown RBP15.42■□□□□ 0.06
ATP12A-202ENST00000381946 TOP2AP11388 1531 aaKnown RBP15.41■□□□□ 0.06
ATP12A-202ENST00000381946 WRNQ14191 1432 aaPredicted RBP eCLIP15.35■□□□□ 0.05
ATP12A-202ENST00000381946 CNGB1Q14028 1251 aaPredicted RBP15.32■□□□□ 0.04
ATP12A-202ENST00000381946 UNC13AQ9UPW8 1703 aa15.29■□□□□ 0.04
ATP12A-202ENST00000381946 BICRAQ9NZM4 1560 aa15.28■□□□□ 0.04
ATP12A-202ENST00000381946 ATAD2BQ9ULI0 1458 aa15.28■□□□□ 0.04
ATP12A-202ENST00000381946 NEUROD1Q13562 356 aa15.26■□□□□ 0.03
ATP12A-202ENST00000381946 SMARCA2P51531 1590 aa15.25■□□□□ 0.03
ATP12A-202ENST00000381946 RUSC2Q8N2Y8 1516 aa15.24■□□□□ 0.03
ATP12A-202ENST00000381946 CEP162Q5TB80 1403 aa15.23■□□□□ 0.03
ATP12A-202ENST00000381946 CLIP1P30622 1438 aa15.17■□□□□ 0.02
ATP12A-202ENST00000381946 POLR3GLQ9BT43 218 aa15.15■□□□□ 0.02
ATP12A-202ENST00000381946 EEA1Q15075 1411 aa15.15■□□□□ 0.02
ATP12A-202ENST00000381946 DIEXFQ68CQ4 756 aaKnown RBP15.14■□□□□ 0.01
ATP12A-202ENST00000381946 MYT1LQ9UL68 1186 aa15.14■□□□□ 0.01
ATP12A-202ENST00000381946 DNAJC5BQ9UF47 199 aa15.13■□□□□ 0.01
ATP12A-202ENST00000381946 TRIM52Q96A61 297 aa15.11■□□□□ 0.01
ATP12A-202ENST00000381946 ZNF777Q9ULD5 760 aaPredicted RBP15.08■□□□□ 0
ATP12A-202ENST00000381946 CHIC2Q9UKJ5 165 aa15.07■□□□□ 0
ATP12A-202ENST00000381946 GOLGA3Q08378 1498 aa15.06■□□□□ 0
ATP12A-202ENST00000381946 TNIKQ9UKE5 1360 aa15.06■□□□□ 0
ATP12A-202ENST00000381946 EIF4G1Q04637 1599 aaKnown RBP15.04■□□□□ -0
ATP12A-202ENST00000381946 CENPBP07199 599 aaPredicted RBP15.02□□□□□ -0.01
ATP12A-202ENST00000381946 CUX2O14529 1486 aa15.01□□□□□ -0.01
ATP12A-202ENST00000381946 KANK4Q5T7N3 995 aaPredicted RBP15□□□□□ -0.01
ATP12A-202ENST00000381946 TDRD9Q8NDG6 1382 aaKnown RBP15□□□□□ -0.01
ATP12A-202ENST00000381946 HIRIP3Q9BW71 556 aaPredicted RBP15□□□□□ -0.01
ATP12A-202ENST00000381946 CEP164Q9UPV0 1460 aa14.99□□□□□ -0.01
ATP12A-202ENST00000381946 ZNF326Q5BKZ1 582 aaKnown RBP14.99□□□□□ -0.01
ATP12A-202ENST00000381946 NCAPD3P42695 1498 aa14.99□□□□□ -0.01
ATP12A-202ENST00000381946 KIF27Q86VH2 1401 aa14.99□□□□□ -0.01
ATP12A-202ENST00000381946 PEG3Q9GZU2 1588 aa14.95□□□□□ -0.02
ATP12A-202ENST00000381946 CHMP7Q8WUX9 453 aaPredicted RBP14.95□□□□□ -0.02
ATP12A-202ENST00000381946 RAPGEF2Q9Y4G8 1499 aa14.94□□□□□ -0.02
ATP12A-202ENST00000381946 CARMIL1Q5VZK9 1371 aa14.9□□□□□ -0.02
ATP12A-202ENST00000381946 CADPSQ9ULU8 1353 aa14.9□□□□□ -0.02
ATP12A-202ENST00000381946 ZNF316A6NFI3 1004 aaPredicted RBP14.89□□□□□ -0.03
ATP12A-202ENST00000381946 SYNJ1O43426 1573 aa14.88□□□□□ -0.03
ATP12A-202ENST00000381946 RRP7BPQ9NSQ0 103 aa14.88□□□□□ -0.03
ATP12A-202ENST00000381946 HMGXB3Q12766 1538 aa14.85□□□□□ -0.03
ATP12A-202ENST00000381946 MTUS2Q5JR59 1369 aa14.84□□□□□ -0.03
ATP12A-202ENST00000381946 NESP48681 1621 aa14.82□□□□□ -0.04
ATP12A-202ENST00000381946 ERCC6Q03468 1493 aa14.8□□□□□ -0.04
ATP12A-202ENST00000381946 SIN3AQ96ST3 1273 aa14.79□□□□□ -0.04
ATP12A-202ENST00000381946 CFTRP13569 1480 aa14.79□□□□□ -0.04
ATP12A-202ENST00000381946 KCNH8Q96L42 1107 aa14.78□□□□□ -0.04
ATP12A-202ENST00000381946 RAD54L2Q9Y4B4 1467 aa14.78□□□□□ -0.04
ATP12A-202ENST00000381946 SENP3Q9H4L4 574 aaPredicted RBP14.77□□□□□ -0.05
ATP12A-202ENST00000381946 CC2D2AQ9P2K1 1620 aa14.76□□□□□ -0.05
ATP12A-202ENST00000381946 DDX10Q13206 875 aaKnown RBP14.74□□□□□ -0.05
ATP12A-202ENST00000381946 FANCD2Q9BXW9 1451 aa14.74□□□□□ -0.05
ATP12A-202ENST00000381946 VPS8Q8N3P4 1428 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms