Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RNA5SP391-201ENST00000363456 119 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 U3.15-201ENST00000365398 212 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.62□□□□□ -1.67
HNF4AP41235 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
HNF4AP41235 GLULP6-201ENST00000399502 913 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 AL109941.1-201ENST00000401925 229 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 RPS24P12-201ENST00000402084 394 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 RPS12P23-201ENST00000419579 400 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 UBE2V1P6-201ENST00000430840 422 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.62□□□□□ -1.67
HNF4AP41235 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.62□□□□□ -1.67
HNF4AP41235 RPS26P2-201ENST00000440331 348 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.62□□□□□ -1.67
HNF4AP41235 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HNF4AP41235 AC073587.1-201ENST00000447093 876 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 AL645939.1-201ENST00000453429 797 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 RPL7P16-201ENST00000479738 738 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.62□□□□□ -1.67
HNF4AP41235 CAB39P1-201ENST00000502277 460 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 PRELID3BP7-201ENST00000503606 469 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 RNU2-30P-201ENST00000516209 141 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.62□□□□□ -1.67
HNF4AP41235 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.62□□□□□ -1.67
HNF4AP41235 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.62□□□□□ -1.67
HNF4AP41235 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.62□□□□□ -1.67
HNF4AP41235 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.62□□□□□ -1.67
HNF4AP41235 PTP4A1P6-201ENST00000531034 478 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.62□□□□□ -1.67
HNF4AP41235 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.62□□□□□ -1.67
HNF4AP41235 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.62□□□□□ -1.67
HNF4AP41235 RN7SL802P-201ENST00000577858 299 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.62□□□□□ -1.67
HNF4AP41235 AC022726.1-201ENST00000587475 207 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 ELOCP28-201ENST00000590044 317 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.62□□□□□ -1.67
HNF4AP41235 AP003117.2-201ENST00000606010 545 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 AC026979.4-201ENST00000606555 645 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HNF4AP41235 AC087385.3-201ENST00000620477 187 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HNF4AP41235 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.62□□□□□ -1.67
HNF4AP41235 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.62□□□□□ -1.67
HNF4AP41235 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HNF4AP41235 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
HNF4AP41235 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HNF4AP41235 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
HNF4AP41235 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
HNF4AP41235 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HNF4AP41235 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.62□□□□□ -1.67
HNF4AP41235 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HNF4AP41235 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
HNF4AP41235 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HNF4AP41235 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.61□□□□□ -1.67
HNF4AP41235 SALL4P2-201ENST00000423288 2910 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HNF4AP41235 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HNF4AP41235 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HNF4AP41235 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HNF4AP41235 AC136624.1-201ENST00000400791 413 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.61□□□□□ -1.67
HNF4AP41235 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.61□□□□□ -1.67
HNF4AP41235 AC104837.2-201ENST00000427236 424 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HNF4AP41235 NPM1P34-201ENST00000428821 893 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 ELOCP6-201ENST00000429066 328 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 FABP7P2-201ENST00000429946 379 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.61□□□□□ -1.67
HNF4AP41235 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HNF4AP41235 GXYLT1P1-201ENST00000446657 490 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 AC104651.2-201ENST00000447549 528 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 CYCSP42-201ENST00000450823 238 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.61□□□□□ -1.67
HNF4AP41235 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.61□□□□□ -1.67
HNF4AP41235 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.61□□□□□ -1.67
HNF4AP41235 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.61□□□□□ -1.67
HNF4AP41235 ELOCP12-201ENST00000458706 328 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 AC063943.1-201ENST00000465434 453 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.61□□□□□ -1.67
HNF4AP41235 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.61□□□□□ -1.67
HNF4AP41235 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HNF4AP41235 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.61□□□□□ -1.67
HNF4AP41235 RNU1-6P-201ENST00000516290 144 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 AC010306.1-201ENST00000523223 1117 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 AP001922.4-201ENST00000526967 290 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 AP000676.2-201ENST00000529711 301 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.61□□□□□ -1.67
HNF4AP41235 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.61□□□□□ -1.67
HNF4AP41235 AC133555.2-201ENST00000550213 292 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 FKBP1BP1-201ENST00000553366 325 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.61□□□□□ -1.67
HNF4AP41235 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.61□□□□□ -1.67
HNF4AP41235 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.61□□□□□ -1.67
HNF4AP41235 AC093249.4-201ENST00000564755 259 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.61□□□□□ -1.67
HNF4AP41235 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.61□□□□□ -1.67
HNF4AP41235 MIR5699-201ENST00000578903 90 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 AC090312.2-201ENST00000582687 378 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.61□□□□□ -1.67
HNF4AP41235 AC011453.2-201ENST00000603737 729 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 BNIP3P19-201ENST00000605397 577 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms