RNA–Protein interactions for RNA: ENST00000435692.6

AC009299.3-203, humanhuman

TSL 5 BASIC

Gene AC009299.3, Length 1,096 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009299.3-203ENST00000435692 AEBP2Q6ZN18 517 aaPredicted RBP26.18■■□□□ 1.78
AC009299.3-203ENST00000435692 CHIC1Q5VXU3 224 aa25.37■■□□□ 1.65
AC009299.3-203ENST00000435692 PHF23Q9BUL5 403 aaPredicted RBP22.29■■□□□ 1.16
AC009299.3-203ENST00000435692 SENP3Q9H4L4 574 aaPredicted RBP22.24■■□□□ 1.15
AC009299.3-203ENST00000435692 FOXD1Q16676 465 aa20.66■□□□□ 0.9
AC009299.3-203ENST00000435692 PLPPR3Q6T4P5 718 aa20.52■□□□□ 0.88
AC009299.3-203ENST00000435692 PPP6R1Q9UPN7 881 aa19.73■□□□□ 0.75
AC009299.3-203ENST00000435692 ADRA2BP18089 450 aa19.71■□□□□ 0.75
AC009299.3-203ENST00000435692 PIAS4Q8N2W9 510 aaPredicted RBP19.44■□□□□ 0.7
AC009299.3-203ENST00000435692 MSH5O43196 834 aa19.13■□□□□ 0.65
AC009299.3-203ENST00000435692 PPP4R3CPQ6ZMV5 832 aa18.06■□□□□ 0.48
AC009299.3-203ENST00000435692 SCAF1Q9H7N4 1312 aaKnown RBP18.03■□□□□ 0.48
AC009299.3-203ENST00000435692 MAPK8IP2Q13387 824 aaPredicted RBP17.94■□□□□ 0.46
AC009299.3-203ENST00000435692 POTEDQ86YR6 584 aa17.77■□□□□ 0.44
AC009299.3-203ENST00000435692 DMRT2Q9Y5R5 561 aa17.72■□□□□ 0.43
AC009299.3-203ENST00000435692 CNKSR2Q8WXI2 1034 aa17.59■□□□□ 0.41
AC009299.3-203ENST00000435692 NCBP3Q53F19 620 aaKnown RBP17.53■□□□□ 0.4
AC009299.3-203ENST00000435692 KCNA4P22459 653 aa17.42■□□□□ 0.38
AC009299.3-203ENST00000435692 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
AC009299.3-203ENST00000435692 HOXD11P31277 338 aaPredicted RBP17.28■□□□□ 0.36
AC009299.3-203ENST00000435692 NPM3O75607 178 aaKnown RBP17.27■□□□□ 0.36
AC009299.3-203ENST00000435692 DCAF8L1A6NGE4 600 aa16.97■□□□□ 0.31
AC009299.3-203ENST00000435692 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
AC009299.3-203ENST00000435692 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
AC009299.3-203ENST00000435692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.47■□□□□ 0.23
AC009299.3-203ENST00000435692 RNF39Q9H2S5 420 aa16.38■□□□□ 0.21
AC009299.3-203ENST00000435692 SLC4A2P04920 1241 aa16.36■□□□□ 0.21
AC009299.3-203ENST00000435692 U3KPZ7 1027 aaPredicted RBP16.18■□□□□ 0.18
AC009299.3-203ENST00000435692 C1QBPQ07021 282 aaKnown RBP16.16■□□□□ 0.18
AC009299.3-203ENST00000435692 CACNB1Q02641 598 aaPredicted RBP16.1■□□□□ 0.17
AC009299.3-203ENST00000435692 FOXD4L1Q9NU39 408 aa16.09■□□□□ 0.17
AC009299.3-203ENST00000435692 ZBTB22O15209 634 aa16.03■□□□□ 0.16
AC009299.3-203ENST00000435692 MYCNP04198 464 aaPredicted RBP15.96■□□□□ 0.15
AC009299.3-203ENST00000435692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.9■□□□□ 0.14
AC009299.3-203ENST00000435692 HNRNPUL2Q1KMD3 747 aaKnown RBP15.9■□□□□ 0.14
AC009299.3-203ENST00000435692 EHMT2Q96KQ7 1210 aa15.86■□□□□ 0.13
AC009299.3-203ENST00000435692 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
AC009299.3-203ENST00000435692 APLP2Q06481 763 aa15.79■□□□□ 0.12
AC009299.3-203ENST00000435692 SPINK5Q9NQ38 1064 aaPredicted RBP15.79■□□□□ 0.12
AC009299.3-203ENST00000435692 CSRNP3Q8WYN3 585 aa15.77■□□□□ 0.12
AC009299.3-203ENST00000435692 CAPN15O75808 1086 aa15.74■□□□□ 0.11
AC009299.3-203ENST00000435692 TRHP20396 242 aaPredicted RBP15.61■□□□□ 0.09
AC009299.3-203ENST00000435692 ZNF219Q9P2Y4 722 aaPredicted RBP15.61■□□□□ 0.09
AC009299.3-203ENST00000435692 ATF5Q9Y2D1 282 aaPredicted RBP15.56■□□□□ 0.08
AC009299.3-203ENST00000435692 ATXN8OSP0DMR3 200 aa15.54■□□□□ 0.08
AC009299.3-203ENST00000435692 DSG3P32926 999 aa15.51■□□□□ 0.07
AC009299.3-203ENST00000435692 ABCB7O75027 752 aa15.43■□□□□ 0.06
AC009299.3-203ENST00000435692 POLA2Q14181 598 aa15.31■□□□□ 0.04
AC009299.3-203ENST00000435692 ZBTB12Q9Y330 459 aaPredicted RBP15.04■□□□□ -0
AC009299.3-203ENST00000435692 FBLN2P98095 1184 aa14.91□□□□□ -0.02
AC009299.3-203ENST00000435692 MKRN4PQ13434 485 aaPredicted RBP14.87□□□□□ -0.03
AC009299.3-203ENST00000435692 OSCARQ8IYS5 282 aa14.81□□□□□ -0.04
AC009299.3-203ENST00000435692 RBM42Q9BTD8 480 aaKnown RBP14.79□□□□□ -0.04
AC009299.3-203ENST00000435692 SPDYE2BA6NHP3 402 aa14.63□□□□□ -0.07
AC009299.3-203ENST00000435692 SPDYE6P0CI01 402 aa14.63□□□□□ -0.07
AC009299.3-203ENST00000435692 SPDYE2Q495Y8 402 aa14.63□□□□□ -0.07
AC009299.3-203ENST00000435692 AKT1S1Q96B36 256 aa14.57□□□□□ -0.08
AC009299.3-203ENST00000435692 ZNF692Q9BU19 519 aaPredicted RBP14.54□□□□□ -0.08
AC009299.3-203ENST00000435692 SSUH2Q9Y2M2 353 aa14.5□□□□□ -0.09
AC009299.3-203ENST00000435692 SPDYE4A6NLX3 237 aa14.44□□□□□ -0.1
AC009299.3-203ENST00000435692 REM2Q8IYK8 340 aaPredicted RBP14.43□□□□□ -0.1
AC009299.3-203ENST00000435692 PABPN1Q86U42 306 aaKnown RBP eCLIP14.34□□□□□ -0.11
AC009299.3-203ENST00000435692 PITPNM1O00562 1244 aa14.27□□□□□ -0.13
AC009299.3-203ENST00000435692 FKBP8Q14318 412 aa14.27□□□□□ -0.13
AC009299.3-203ENST00000435692 CHRDL2Q6WN34 429 aa14.26□□□□□ -0.13
AC009299.3-203ENST00000435692 SPDYE1Q8NFV5 336 aaPredicted RBP14.24□□□□□ -0.13
AC009299.3-203ENST00000435692 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
AC009299.3-203ENST00000435692 PROM2Q8N271 834 aa14.18□□□□□ -0.14
AC009299.3-203ENST00000435692 STAG3Q9UJ98 1225 aa14.06□□□□□ -0.16
AC009299.3-203ENST00000435692 PRR29P0C7W0 189 aa14.04□□□□□ -0.16
AC009299.3-203ENST00000435692 FXR2P51116 673 aaKnown RBP eCLIP14.04□□□□□ -0.16
AC009299.3-203ENST00000435692 PIP4P2Q8N4L2 257 aa14.04□□□□□ -0.16
AC009299.3-203ENST00000435692 POTEHQ6S545 545 aa14.03□□□□□ -0.16
AC009299.3-203ENST00000435692 PRKAR2AP13861 404 aaKnown RBP13.9□□□□□ -0.18
AC009299.3-203ENST00000435692 CHADLQ6NUI6 762 aa13.87□□□□□ -0.19
AC009299.3-203ENST00000435692 CREBZFQ9NS37 354 aa13.82□□□□□ -0.2
AC009299.3-203ENST00000435692 FBXO3Q9UK99 471 aa13.81□□□□□ -0.2
AC009299.3-203ENST00000435692 MIER1Q8N108 512 aa13.71□□□□□ -0.21
AC009299.3-203ENST00000435692 FARP1Q9Y4F1 1045 aaPredicted RBP13.71□□□□□ -0.21
AC009299.3-203ENST00000435692 PLCD3Q8N3E9 789 aa13.67□□□□□ -0.22
AC009299.3-203ENST00000435692 PLEKHG5O94827 1062 aa13.65□□□□□ -0.22
AC009299.3-203ENST00000435692 MNX1P50219 401 aaPredicted RBP13.65□□□□□ -0.22
AC009299.3-203ENST00000435692 HAX1O00165 279 aa13.63□□□□□ -0.23
AC009299.3-203ENST00000435692 VASPP50552 380 aaPredicted RBP13.63□□□□□ -0.23
AC009299.3-203ENST00000435692 NPM1P06748 294 aaKnown RBP eCLIP13.58□□□□□ -0.24
AC009299.3-203ENST00000435692 C19orf67A6NJJ6 358 aa13.57□□□□□ -0.24
AC009299.3-203ENST00000435692 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
AC009299.3-203ENST00000435692 CD44P16070 742 aaKnown RBP13.5□□□□□ -0.25
AC009299.3-203ENST00000435692 EVX2Q03828 476 aa13.5□□□□□ -0.25
AC009299.3-203ENST00000435692 KLHL34Q8N239 644 aa13.44□□□□□ -0.26
AC009299.3-203ENST00000435692 IFNLR1Q8IU57 520 aaPredicted RBP13.43□□□□□ -0.26
AC009299.3-203ENST00000435692 SP7Q8TDD2 431 aaPredicted RBP13.41□□□□□ -0.26
AC009299.3-203ENST00000435692 PAK3O75914 559 aaPredicted RBP13.4□□□□□ -0.26
AC009299.3-203ENST00000435692 ZRANB1Q9UGI0 708 aa13.39□□□□□ -0.27
AC009299.3-203ENST00000435692 NUBP1P53384 320 aa13.38□□□□□ -0.27
AC009299.3-203ENST00000435692 RASEFQ8IZ41 740 aa13.38□□□□□ -0.27
AC009299.3-203ENST00000435692 TSPYL2Q9H2G4 693 aaPredicted RBP13.35□□□□□ -0.27
AC009299.3-203ENST00000435692 ZNF579Q8NAF0 562 aaKnown RBP13.32□□□□□ -0.28
AC009299.3-203ENST00000435692 SPOCK2Q92563 424 aa13.31□□□□□ -0.28
AC009299.3-203ENST00000435692 FAM212AQ96EL1 285 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms