RNA–Protein interactions for RNA: ENST00000456514.1

LINC00601-201, long intergenic non-protein coding RNA 601, humanhuman

TSL 3 BASIC

Gene LINC00601, Length 1,168 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00601-201ENST00000456514 AEBP2Q6ZN18 517 aaPredicted RBP30.06■■■□□ 2.4
LINC00601-201ENST00000456514 CHIC1Q5VXU3 224 aa28.35■■■□□ 2.13
LINC00601-201ENST00000456514 SENP3Q9H4L4 574 aaPredicted RBP25.76■■□□□ 1.71
LINC00601-201ENST00000456514 PHF23Q9BUL5 403 aaPredicted RBP25.37■■□□□ 1.65
LINC00601-201ENST00000456514 FOXD1Q16676 465 aa23.99■■□□□ 1.43
LINC00601-201ENST00000456514 MSH5O43196 834 aa22.6■■□□□ 1.21
LINC00601-201ENST00000456514 PLPPR3Q6T4P5 718 aa22.58■■□□□ 1.21
LINC00601-201ENST00000456514 POTEDQ86YR6 584 aa22.44■■□□□ 1.18
LINC00601-201ENST00000456514 PIAS4Q8N2W9 510 aaPredicted RBP22.42■■□□□ 1.18
LINC00601-201ENST00000456514 PPP6R1Q9UPN7 881 aa22.23■■□□□ 1.15
LINC00601-201ENST00000456514 ADRA2BP18089 450 aa22.18■■□□□ 1.14
LINC00601-201ENST00000456514 MAPK8IP2Q13387 824 aaPredicted RBP20.44■□□□□ 0.86
LINC00601-201ENST00000456514 SCAF1Q9H7N4 1312 aaKnown RBP20.36■□□□□ 0.85
LINC00601-201ENST00000456514 DMRT2Q9Y5R5 561 aa20.35■□□□□ 0.85
LINC00601-201ENST00000456514 PPP4R3CPQ6ZMV5 832 aa19.75■□□□□ 0.75
LINC00601-201ENST00000456514 DCAF8L1A6NGE4 600 aa19.65■□□□□ 0.74
LINC00601-201ENST00000456514 CACNB1Q02641 598 aaPredicted RBP19.58■□□□□ 0.72
LINC00601-201ENST00000456514 HOXD11P31277 338 aaPredicted RBP19.49■□□□□ 0.71
LINC00601-201ENST00000456514 CNKSR2Q8WXI2 1034 aa19.44■□□□□ 0.7
LINC00601-201ENST00000456514 RNF216Q9NWF9 866 aaPredicted RBP19.31■□□□□ 0.68
LINC00601-201ENST00000456514 RNF39Q9H2S5 420 aa19.22■□□□□ 0.67
LINC00601-201ENST00000456514 NCBP3Q53F19 620 aaKnown RBP18.97■□□□□ 0.63
LINC00601-201ENST00000456514 C1QBPQ07021 282 aaKnown RBP18.96■□□□□ 0.63
LINC00601-201ENST00000456514 DNAJC5BQ9UF47 199 aa18.86■□□□□ 0.61
LINC00601-201ENST00000456514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.67■□□□□ 0.58
LINC00601-201ENST00000456514 NPM3O75607 178 aaKnown RBP18.62■□□□□ 0.57
LINC00601-201ENST00000456514 U3KPZ7 1027 aaPredicted RBP18.17■□□□□ 0.5
LINC00601-201ENST00000456514 CAPN15O75808 1086 aa18.05■□□□□ 0.48
LINC00601-201ENST00000456514 KCNA4P22459 653 aa18.05■□□□□ 0.48
LINC00601-201ENST00000456514 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
LINC00601-201ENST00000456514 DSG3P32926 999 aa17.92■□□□□ 0.46
LINC00601-201ENST00000456514 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
LINC00601-201ENST00000456514 APLP2Q06481 763 aa17.74■□□□□ 0.43
LINC00601-201ENST00000456514 TRHP20396 242 aaPredicted RBP17.7■□□□□ 0.42
LINC00601-201ENST00000456514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.65■□□□□ 0.42
LINC00601-201ENST00000456514 HNRNPUL2Q1KMD3 747 aaKnown RBP17.65■□□□□ 0.42
LINC00601-201ENST00000456514 ZNF219Q9P2Y4 722 aaPredicted RBP17.63■□□□□ 0.41
LINC00601-201ENST00000456514 ABCB7O75027 752 aa17.58■□□□□ 0.4
LINC00601-201ENST00000456514 POTEHQ6S545 545 aa17.56■□□□□ 0.4
LINC00601-201ENST00000456514 SAMD1Q6SPF0 538 aaPredicted RBP17.52■□□□□ 0.4
LINC00601-201ENST00000456514 MYCNP04198 464 aaPredicted RBP17.27■□□□□ 0.36
LINC00601-201ENST00000456514 RBM42Q9BTD8 480 aaKnown RBP17.17■□□□□ 0.34
LINC00601-201ENST00000456514 POLA2Q14181 598 aa17.13■□□□□ 0.33
LINC00601-201ENST00000456514 SLC4A1APQ9BWU0 796 aaKnown RBP17.04■□□□□ 0.32
LINC00601-201ENST00000456514 FOXD4L1Q9NU39 408 aa16.95■□□□□ 0.3
LINC00601-201ENST00000456514 CHRDL2Q6WN34 429 aa16.87■□□□□ 0.29
LINC00601-201ENST00000456514 ATF5Q9Y2D1 282 aaPredicted RBP16.83■□□□□ 0.28
LINC00601-201ENST00000456514 ZBTB12Q9Y330 459 aaPredicted RBP16.8■□□□□ 0.28
LINC00601-201ENST00000456514 AKT1S1Q96B36 256 aa16.69■□□□□ 0.26
LINC00601-201ENST00000456514 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
LINC00601-201ENST00000456514 ZBTB22O15209 634 aa16.55■□□□□ 0.24
LINC00601-201ENST00000456514 REM2Q8IYK8 340 aaPredicted RBP16.53■□□□□ 0.24
LINC00601-201ENST00000456514 ATXN8OSP0DMR3 200 aa16.44■□□□□ 0.22
LINC00601-201ENST00000456514 PIP4P2Q8N4L2 257 aa16.39■□□□□ 0.21
LINC00601-201ENST00000456514 PITPNM1O00562 1244 aa16.35■□□□□ 0.21
LINC00601-201ENST00000456514 SP7Q8TDD2 431 aaPredicted RBP16.35■□□□□ 0.21
LINC00601-201ENST00000456514 FBLN2P98095 1184 aa16.3■□□□□ 0.2
LINC00601-201ENST00000456514 SPDYE2BA6NHP3 402 aa16.23■□□□□ 0.19
LINC00601-201ENST00000456514 HAX1O00165 279 aa16.23■□□□□ 0.19
LINC00601-201ENST00000456514 SPDYE6P0CI01 402 aa16.23■□□□□ 0.19
LINC00601-201ENST00000456514 FXR2P51116 673 aaKnown RBP eCLIP16.23■□□□□ 0.19
LINC00601-201ENST00000456514 SPDYE2Q495Y8 402 aa16.23■□□□□ 0.19
LINC00601-201ENST00000456514 MKRN4PQ13434 485 aaPredicted RBP16.04■□□□□ 0.16
LINC00601-201ENST00000456514 CLEC11AQ9Y240 323 aa16.04■□□□□ 0.16
LINC00601-201ENST00000456514 SPDYE1Q8NFV5 336 aaPredicted RBP16.03■□□□□ 0.16
LINC00601-201ENST00000456514 ZNF692Q9BU19 519 aaPredicted RBP16.02■□□□□ 0.16
LINC00601-201ENST00000456514 PRKAR2AP13861 404 aaKnown RBP15.96■□□□□ 0.15
LINC00601-201ENST00000456514 SSUH2Q9Y2M2 353 aa15.94■□□□□ 0.14
LINC00601-201ENST00000456514 EVX2Q03828 476 aa15.9■□□□□ 0.14
LINC00601-201ENST00000456514 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
LINC00601-201ENST00000456514 C19orf67A6NJJ6 358 aa15.73■□□□□ 0.11
LINC00601-201ENST00000456514 PRR29P0C7W0 189 aa15.73■□□□□ 0.11
LINC00601-201ENST00000456514 CHADLQ6NUI6 762 aa15.72■□□□□ 0.11
LINC00601-201ENST00000456514 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
LINC00601-201ENST00000456514 GABBR2O75899 941 aa15.58■□□□□ 0.08
LINC00601-201ENST00000456514 FARP1Q9Y4F1 1045 aaPredicted RBP15.45■□□□□ 0.06
LINC00601-201ENST00000456514 CD44P16070 742 aaKnown RBP15.44■□□□□ 0.06
LINC00601-201ENST00000456514 LHX8Q68G74 356 aa15.34■□□□□ 0.05
LINC00601-201ENST00000456514 EHMT2Q96KQ7 1210 aa15.34■□□□□ 0.05
LINC00601-201ENST00000456514 STAG3Q9UJ98 1225 aa15.3■□□□□ 0.04
LINC00601-201ENST00000456514 CLCN6P51797 869 aa15.27■□□□□ 0.04
LINC00601-201ENST00000456514 SPDYE4A6NLX3 237 aa15.22■□□□□ 0.03
LINC00601-201ENST00000456514 CREBZFQ9NS37 354 aa15.21■□□□□ 0.03
LINC00601-201ENST00000456514 POTEIP0CG38 1075 aa15.2■□□□□ 0.02
LINC00601-201ENST00000456514 ZRANB1Q9UGI0 708 aa15.2■□□□□ 0.02
LINC00601-201ENST00000456514 DCBLD2Q96PD2 775 aa15.18■□□□□ 0.02
LINC00601-201ENST00000456514 ZNF579Q8NAF0 562 aaKnown RBP15.15■□□□□ 0.02
LINC00601-201ENST00000456514 PAK3O75914 559 aaPredicted RBP15.07■□□□□ 0
LINC00601-201ENST00000456514 NPM1P06748 294 aaKnown RBP eCLIP15□□□□□ -0.01
LINC00601-201ENST00000456514 GALR2O43603 387 aaPredicted RBP14.99□□□□□ -0.01
LINC00601-201ENST00000456514 PHF12Q96QT6 1004 aa14.94□□□□□ -0.02
LINC00601-201ENST00000456514 MNX1P50219 401 aaPredicted RBP14.88□□□□□ -0.03
LINC00601-201ENST00000456514 PROM2Q8N271 834 aa14.72□□□□□ -0.05
LINC00601-201ENST00000456514 MS4A3Q96HJ5 214 aa14.72□□□□□ -0.05
LINC00601-201ENST00000456514 TSPYL2Q9H2G4 693 aaPredicted RBP14.72□□□□□ -0.05
LINC00601-201ENST00000456514 OTUD5Q96G74 571 aa14.71□□□□□ -0.05
LINC00601-201ENST00000456514 POTEB2H3BUK9 544 aa14.69□□□□□ -0.06
LINC00601-201ENST00000456514 PELP1Q8IZL8 1130 aaKnown RBP14.69□□□□□ -0.06
LINC00601-201ENST00000456514 PLEKHG5O94827 1062 aa14.65□□□□□ -0.06
LINC00601-201ENST00000456514 ASTLQ6HA08 431 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms