RNA–Protein interactions for RNA: ENST00000554678.1

AL355075.3-201, humanhuman

TSL 5 BASIC

Gene AL355075.3, Length 492 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355075.3-201ENST00000554678 AEBP2Q6ZN18 517 aaPredicted RBP26.76■■□□□ 1.87
AL355075.3-201ENST00000554678 CHIC1Q5VXU3 224 aa25.84■■□□□ 1.73
AL355075.3-201ENST00000554678 SENP3Q9H4L4 574 aaPredicted RBP22.8■■□□□ 1.24
AL355075.3-201ENST00000554678 PHF23Q9BUL5 403 aaPredicted RBP22.68■■□□□ 1.22
AL355075.3-201ENST00000554678 FOXD1Q16676 465 aa21.17■□□□□ 0.98
AL355075.3-201ENST00000554678 PLPPR3Q6T4P5 718 aa20.87■□□□□ 0.93
AL355075.3-201ENST00000554678 PPP6R1Q9UPN7 881 aa20.12■□□□□ 0.81
AL355075.3-201ENST00000554678 ADRA2BP18089 450 aa20.1■□□□□ 0.81
AL355075.3-201ENST00000554678 PIAS4Q8N2W9 510 aaPredicted RBP19.92■□□□□ 0.78
AL355075.3-201ENST00000554678 MSH5O43196 834 aa19.69■□□□□ 0.74
AL355075.3-201ENST00000554678 POTEDQ86YR6 584 aa18.47■□□□□ 0.55
AL355075.3-201ENST00000554678 SCAF1Q9H7N4 1312 aaKnown RBP18.45■□□□□ 0.54
AL355075.3-201ENST00000554678 MAPK8IP2Q13387 824 aaPredicted RBP18.34■□□□□ 0.53
AL355075.3-201ENST00000554678 PPP4R3CPQ6ZMV5 832 aa18.34■□□□□ 0.53
AL355075.3-201ENST00000554678 DMRT2Q9Y5R5 561 aa18.13■□□□□ 0.49
AL355075.3-201ENST00000554678 CNKSR2Q8WXI2 1034 aa17.91■□□□□ 0.46
AL355075.3-201ENST00000554678 NCBP3Q53F19 620 aaKnown RBP17.81■□□□□ 0.44
AL355075.3-201ENST00000554678 RNF216Q9NWF9 866 aaPredicted RBP17.63■□□□□ 0.41
AL355075.3-201ENST00000554678 HOXD11P31277 338 aaPredicted RBP17.62■□□□□ 0.41
AL355075.3-201ENST00000554678 KCNA4P22459 653 aa17.54■□□□□ 0.4
AL355075.3-201ENST00000554678 NPM3O75607 178 aaKnown RBP17.49■□□□□ 0.39
AL355075.3-201ENST00000554678 DCAF8L1A6NGE4 600 aa17.43■□□□□ 0.38
AL355075.3-201ENST00000554678 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
AL355075.3-201ENST00000554678 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.86■□□□□ 0.29
AL355075.3-201ENST00000554678 RNF39Q9H2S5 420 aa16.82■□□□□ 0.28
AL355075.3-201ENST00000554678 SLC4A1APQ9BWU0 796 aaKnown RBP16.67■□□□□ 0.26
AL355075.3-201ENST00000554678 CACNB1Q02641 598 aaPredicted RBP16.66■□□□□ 0.26
AL355075.3-201ENST00000554678 C1QBPQ07021 282 aaKnown RBP16.61■□□□□ 0.25
AL355075.3-201ENST00000554678 SLC4A2P04920 1241 aa16.58■□□□□ 0.24
AL355075.3-201ENST00000554678 U3KPZ7 1027 aaPredicted RBP16.49■□□□□ 0.23
AL355075.3-201ENST00000554678 FOXD4L1Q9NU39 408 aa16.25■□□□□ 0.19
AL355075.3-201ENST00000554678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.23■□□□□ 0.19
AL355075.3-201ENST00000554678 HNRNPUL2Q1KMD3 747 aaKnown RBP16.23■□□□□ 0.19
AL355075.3-201ENST00000554678 MYCNP04198 464 aaPredicted RBP16.19■□□□□ 0.18
AL355075.3-201ENST00000554678 SAMD1Q6SPF0 538 aaPredicted RBP16.15■□□□□ 0.18
AL355075.3-201ENST00000554678 APLP2Q06481 763 aa16.14■□□□□ 0.17
AL355075.3-201ENST00000554678 CAPN15O75808 1086 aa16.13■□□□□ 0.17
AL355075.3-201ENST00000554678 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
AL355075.3-201ENST00000554678 ZBTB22O15209 634 aa16.11■□□□□ 0.17
AL355075.3-201ENST00000554678 TRHP20396 242 aaPredicted RBP15.97■□□□□ 0.15
AL355075.3-201ENST00000554678 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
AL355075.3-201ENST00000554678 DSG3P32926 999 aa15.89■□□□□ 0.13
AL355075.3-201ENST00000554678 EHMT2Q96KQ7 1210 aa15.83■□□□□ 0.12
AL355075.3-201ENST00000554678 ABCB7O75027 752 aa15.78■□□□□ 0.12
AL355075.3-201ENST00000554678 CSRNP3Q8WYN3 585 aa15.76■□□□□ 0.11
AL355075.3-201ENST00000554678 ATF5Q9Y2D1 282 aaPredicted RBP15.76■□□□□ 0.11
AL355075.3-201ENST00000554678 ATXN8OSP0DMR3 200 aa15.72■□□□□ 0.11
AL355075.3-201ENST00000554678 POLA2Q14181 598 aa15.62■□□□□ 0.09
AL355075.3-201ENST00000554678 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
AL355075.3-201ENST00000554678 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
AL355075.3-201ENST00000554678 FBLN2P98095 1184 aa15.17■□□□□ 0.02
AL355075.3-201ENST00000554678 OSCARQ8IYS5 282 aa15.09■□□□□ 0.01
AL355075.3-201ENST00000554678 MKRN4PQ13434 485 aaPredicted RBP15.04■□□□□ -0
AL355075.3-201ENST00000554678 AKT1S1Q96B36 256 aa14.92□□□□□ -0.02
AL355075.3-201ENST00000554678 SPDYE2BA6NHP3 402 aa14.9□□□□□ -0.02
AL355075.3-201ENST00000554678 SPDYE6P0CI01 402 aa14.9□□□□□ -0.02
AL355075.3-201ENST00000554678 SPDYE2Q495Y8 402 aa14.9□□□□□ -0.02
AL355075.3-201ENST00000554678 ZNF692Q9BU19 519 aaPredicted RBP14.81□□□□□ -0.04
AL355075.3-201ENST00000554678 REM2Q8IYK8 340 aaPredicted RBP14.77□□□□□ -0.05
AL355075.3-201ENST00000554678 SSUH2Q9Y2M2 353 aa14.72□□□□□ -0.05
AL355075.3-201ENST00000554678 CHRDL2Q6WN34 429 aa14.67□□□□□ -0.06
AL355075.3-201ENST00000554678 SPDYE4A6NLX3 237 aa14.6□□□□□ -0.07
AL355075.3-201ENST00000554678 PITPNM1O00562 1244 aa14.59□□□□□ -0.07
AL355075.3-201ENST00000554678 PABPN1Q86U42 306 aaKnown RBP eCLIP14.59□□□□□ -0.07
AL355075.3-201ENST00000554678 POTEHQ6S545 545 aa14.57□□□□□ -0.08
AL355075.3-201ENST00000554678 SPDYE1Q8NFV5 336 aaPredicted RBP14.55□□□□□ -0.08
AL355075.3-201ENST00000554678 CLEC11AQ9Y240 323 aa14.52□□□□□ -0.09
AL355075.3-201ENST00000554678 PIP4P2Q8N4L2 257 aa14.41□□□□□ -0.1
AL355075.3-201ENST00000554678 FXR2P51116 673 aaKnown RBP eCLIP14.38□□□□□ -0.11
AL355075.3-201ENST00000554678 PRR29P0C7W0 189 aa14.34□□□□□ -0.11
AL355075.3-201ENST00000554678 FKBP8Q14318 412 aa14.31□□□□□ -0.12
AL355075.3-201ENST00000554678 STAG3Q9UJ98 1225 aa14.31□□□□□ -0.12
AL355075.3-201ENST00000554678 PROM2Q8N271 834 aa14.25□□□□□ -0.13
AL355075.3-201ENST00000554678 PRKAR2AP13861 404 aaKnown RBP14.24□□□□□ -0.13
AL355075.3-201ENST00000554678 CHADLQ6NUI6 762 aa14.17□□□□□ -0.14
AL355075.3-201ENST00000554678 HAX1O00165 279 aa14.07□□□□□ -0.16
AL355075.3-201ENST00000554678 CREBZFQ9NS37 354 aa14.04□□□□□ -0.16
AL355075.3-201ENST00000554678 FARP1Q9Y4F1 1045 aaPredicted RBP14.01□□□□□ -0.17
AL355075.3-201ENST00000554678 C19orf67A6NJJ6 358 aa13.91□□□□□ -0.18
AL355075.3-201ENST00000554678 FBXO3Q9UK99 471 aa13.91□□□□□ -0.18
AL355075.3-201ENST00000554678 MIER1Q8N108 512 aa13.9□□□□□ -0.18
AL355075.3-201ENST00000554678 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
AL355075.3-201ENST00000554678 EVX2Q03828 476 aa13.86□□□□□ -0.19
AL355075.3-201ENST00000554678 PLCD3Q8N3E9 789 aa13.86□□□□□ -0.19
AL355075.3-201ENST00000554678 SP7Q8TDD2 431 aaPredicted RBP13.86□□□□□ -0.19
AL355075.3-201ENST00000554678 NPM1P06748 294 aaKnown RBP eCLIP13.85□□□□□ -0.19
AL355075.3-201ENST00000554678 MNX1P50219 401 aaPredicted RBP13.83□□□□□ -0.2
AL355075.3-201ENST00000554678 CD44P16070 742 aaKnown RBP13.82□□□□□ -0.2
AL355075.3-201ENST00000554678 ZBTB47Q9UFB7 747 aaPredicted RBP13.72□□□□□ -0.21
AL355075.3-201ENST00000554678 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.21
AL355075.3-201ENST00000554678 VASPP50552 380 aaPredicted RBP13.7□□□□□ -0.22
AL355075.3-201ENST00000554678 ZRANB1Q9UGI0 708 aa13.7□□□□□ -0.22
AL355075.3-201ENST00000554678 GABBR2O75899 941 aa13.61□□□□□ -0.23
AL355075.3-201ENST00000554678 ZNF579Q8NAF0 562 aaKnown RBP13.6□□□□□ -0.23
AL355075.3-201ENST00000554678 TSPYL2Q9H2G4 693 aaPredicted RBP13.6□□□□□ -0.23
AL355075.3-201ENST00000554678 KLHL34Q8N239 644 aa13.59□□□□□ -0.23
AL355075.3-201ENST00000554678 CLCN6P51797 869 aa13.57□□□□□ -0.24
AL355075.3-201ENST00000554678 RASEFQ8IZ41 740 aa13.56□□□□□ -0.24
AL355075.3-201ENST00000554678 NUBP1P53384 320 aa13.53□□□□□ -0.24
AL355075.3-201ENST00000554678 PHF12Q96QT6 1004 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms