Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 AC019155.2-201ENST00000420224 1918 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
HOXD11P31277 LINC01310-201ENST00000380981 4015 ntTSL 2 BASIC9.05□□□□□ -0.96
HOXD11P31277 TWISTNB-201ENST00000222567 3942 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
HOXD11P31277 FAM149B1P1-201ENST00000533428 1610 ntBASIC9.05□□□□□ -0.96
HOXD11P31277 TMEM161B-201ENST00000296595 2594 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
HOXD11P31277 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
HOXD11P31277 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
HOXD11P31277 TRPV1-207ENST00000572705 4166 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
HOXD11P31277 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
HOXD11P31277 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
HOXD11P31277 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC9.05□□□□□ -0.96
HOXD11P31277 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
HOXD11P31277 TRPS1-209ENST00000519674 3116 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
HOXD11P31277 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC9.05□□□□□ -0.96
HOXD11P31277 NIPAL3-201ENST00000003912 5481 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HOXD11P31277 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC9.04□□□□□ -0.96
HOXD11P31277 TSPAN18-201ENST00000340160 4229 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
HOXD11P31277 RRP12-203ENST00000414986 4242 ntAPPRIS ALT1 TSL 2 BASIC9.04□□□□□ -0.96
HOXD11P31277 GPR155-202ENST00000392551 4876 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
HOXD11P31277 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
HOXD11P31277 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HOXD11P31277 OR51S1-201ENST00000322101 1750 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
HOXD11P31277 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC9.04□□□□□ -0.96
HOXD11P31277 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HOXD11P31277 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC9.04□□□□□ -0.96
HOXD11P31277 ZNF285-201ENST00000544719 2793 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
HOXD11P31277 ZNF138-202ENST00000359735 2679 ntTSL 4 BASIC9.04□□□□□ -0.96
HOXD11P31277 AC145207.5-201ENST00000582866 2682 ntBASIC9.04□□□□□ -0.96
HOXD11P31277 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
HOXD11P31277 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
HOXD11P31277 ITGA11-202ENST00000423218 10192 ntAPPRIS ALT1 TSL 2 BASIC9.04□□□□□ -0.96
HOXD11P31277 GLULP5-201ENST00000547831 1390 ntBASIC9.04□□□□□ -0.96
HOXD11P31277 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC9.04□□□□□ -0.96
HOXD11P31277 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC9.04□□□□□ -0.96
HOXD11P31277 SNORD58C-201ENST00000365223 64 ntBASIC9.04□□□□□ -0.96
HOXD11P31277 RNU6-756P-201ENST00000383997 107 ntBASIC9.04□□□□□ -0.96
HOXD11P31277 RNU6-1152P-201ENST00000384576 107 ntBASIC9.04□□□□□ -0.96
HOXD11P31277 MRPS21P2-201ENST00000424704 264 ntBASIC9.04□□□□□ -0.96
HOXD11P31277 RPL12P15-201ENST00000433385 499 ntBASIC9.04□□□□□ -0.96
HOXD11P31277 NEFLP1-201ENST00000436364 984 ntBASIC9.04□□□□□ -0.96
HOXD11P31277 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC9.04□□□□□ -0.96
HOXD11P31277 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC9.04□□□□□ -0.96
HOXD11P31277 RPL32P33-201ENST00000487023 394 ntBASIC9.04□□□□□ -0.96
HOXD11P31277 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC9.04□□□□□ -0.96
HOXD11P31277 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HOXD11P31277 RNU6-155P-201ENST00000516347 100 ntBASIC9.04□□□□□ -0.96
HOXD11P31277 AC048344.2-201ENST00000547280 147 ntBASIC9.04□□□□□ -0.96
HOXD11P31277 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC9.04□□□□□ -0.96
HOXD11P31277 HMGB1P14-201ENST00000557424 591 ntBASIC9.04□□□□□ -0.96
HOXD11P31277 AC007448.1-201ENST00000582714 234 ntBASIC9.04□□□□□ -0.96
HOXD11P31277 AL078624.2-201ENST00000605063 554 ntBASIC9.04□□□□□ -0.96
HOXD11P31277 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC9.04□□□□□ -0.96
HOXD11P31277 SLC12A1-203ENST00000396577 4708 ntAPPRIS ALT1 TSL 5 BASIC9.04□□□□□ -0.96
HOXD11P31277 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
HOXD11P31277 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC9.04□□□□□ -0.96
HOXD11P31277 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
HOXD11P31277 CD46-209ENST00000367047 3089 ntTSL 5 BASIC9.04□□□□□ -0.96
HOXD11P31277 NDUFS1-203ENST00000432169 2080 ntTSL 2 BASIC9.04□□□□□ -0.96
HOXD11P31277 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC9.04□□□□□ -0.96
HOXD11P31277 SRSF6-201ENST00000244020 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
HOXD11P31277 INPP5F-202ENST00000369080 2882 ntTSL 2 BASIC9.04□□□□□ -0.96
HOXD11P31277 AL392183.1-201ENST00000606622 2436 ntTSL 4 BASIC9.04□□□□□ -0.96
HOXD11P31277 TAF1A-201ENST00000350027 1966 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
HOXD11P31277 PRDM10-201ENST00000304538 5817 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HOXD11P31277 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HOXD11P31277 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HOXD11P31277 XCR1-201ENST00000309285 5281 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
HOXD11P31277 SRGAP2B-204ENST00000612199 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
HOXD11P31277 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
HOXD11P31277 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
HOXD11P31277 RAD17-204ENST00000354312 2943 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
HOXD11P31277 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
HOXD11P31277 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HOXD11P31277 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC9.03□□□□□ -0.96
HOXD11P31277 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
HOXD11P31277 GPHN-201ENST00000315266 4193 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HOXD11P31277 POLD3-201ENST00000263681 3821 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HOXD11P31277 MAPRE2-204ENST00000538170 4093 ntTSL 2 BASIC9.03□□□□□ -0.96
HOXD11P31277 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
HOXD11P31277 LINC02554-201ENST00000426467 5052 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
HOXD11P31277 EGF-201ENST00000265171 4880 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HOXD11P31277 NELL1-202ENST00000325319 3094 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
HOXD11P31277 HSPA9-201ENST00000297185 3321 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
HOXD11P31277 RN7SKP117-201ENST00000410175 264 ntBASIC9.03□□□□□ -0.96
HOXD11P31277 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC9.03□□□□□ -0.96
HOXD11P31277 AL109810.1-201ENST00000435008 495 ntBASIC9.03□□□□□ -0.96
HOXD11P31277 AL445687.1-201ENST00000439946 251 ntBASIC9.03□□□□□ -0.96
HOXD11P31277 RPL39P29-201ENST00000447779 157 ntBASIC9.03□□□□□ -0.96
HOXD11P31277 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC9.03□□□□□ -0.96
HOXD11P31277 RN7SL430P-201ENST00000464176 242 ntBASIC9.03□□□□□ -0.96
HOXD11P31277 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC9.03□□□□□ -0.96
HOXD11P31277 OR10Y1P-201ENST00000528485 974 ntBASIC9.03□□□□□ -0.96
HOXD11P31277 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC9.03□□□□□ -0.96
HOXD11P31277 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC9.03□□□□□ -0.96
HOXD11P31277 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC9.03□□□□□ -0.96
HOXD11P31277 LINC00555-201ENST00000569288 442 ntBASIC9.03□□□□□ -0.96
HOXD11P31277 GEMIN8P2-201ENST00000569855 700 ntBASIC9.03□□□□□ -0.96
HOXD11P31277 CDC42EP3P1-201ENST00000601004 764 ntBASIC9.03□□□□□ -0.96
HOXD11P31277 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC9.03□□□□□ -0.96
HOXD11P31277 AL139098.2-201ENST00000608233 381 ntBASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 399.3 ms