Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LRRTM2O43300 MIR421-201ENST00000365696 85 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 SNORA70.10-201ENST00000384515 134 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LRRTM2O43300 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
LRRTM2O43300 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LRRTM2O43300 HSPD1P16-201ENST00000402302 394 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 AL589655.1-201ENST00000405398 482 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.4□□□□□ -1.71
LRRTM2O43300 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRTM2O43300 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.4□□□□□ -1.71
LRRTM2O43300 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.4□□□□□ -1.71
LRRTM2O43300 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.4□□□□□ -1.71
LRRTM2O43300 AC009965.2-201ENST00000425328 970 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 AL390879.2-203ENST00000426943 1121 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRTM2O43300 TDGF1P1-201ENST00000445734 527 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 EIF2S2P2-201ENST00000447161 982 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 CEACAMP6-201ENST00000452007 574 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 HMGB3P21-201ENST00000452483 547 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRTM2O43300 RN7SL41P-201ENST00000476144 297 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
LRRTM2O43300 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.4□□□□□ -1.71
LRRTM2O43300 SLC25A15P5-201ENST00000508033 253 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRTM2O43300 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.4□□□□□ -1.71
LRRTM2O43300 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.4□□□□□ -1.71
LRRTM2O43300 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.4□□□□□ -1.71
LRRTM2O43300 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.4□□□□□ -1.71
LRRTM2O43300 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRTM2O43300 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.4□□□□□ -1.71
LRRTM2O43300 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.4□□□□□ -1.71
LRRTM2O43300 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.4□□□□□ -1.71
LRRTM2O43300 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.4□□□□□ -1.71
LRRTM2O43300 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LRRTM2O43300 AL356218.2-201ENST00000605264 187 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 AC005021.1-201ENST00000608730 355 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 AC084036.1-201ENST00000609190 508 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 AL121873.1-201ENST00000616013 524 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 AC015804.1-201ENST00000622935 435 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 LINC00216-201ENST00000623548 1126 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 AC106730.3-201ENST00000624568 641 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRTM2O43300 AL592182.3-201ENST00000642132 3304 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRTM2O43300 DDX18P5-201ENST00000534547 1306 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
LRRTM2O43300 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
LRRTM2O43300 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRTM2O43300 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.4□□□□□ -1.71
LRRTM2O43300 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
LRRTM2O43300 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRTM2O43300 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRTM2O43300 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.39□□□□□ -1.71
LRRTM2O43300 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRTM2O43300 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.39□□□□□ -1.71
LRRTM2O43300 RNU4-39P-201ENST00000362455 127 ntBASIC4.39□□□□□ -1.71
LRRTM2O43300 CCNB2P1-201ENST00000399411 1150 ntBASIC4.39□□□□□ -1.71
LRRTM2O43300 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRTM2O43300 AC234779.1-201ENST00000425910 285 ntBASIC4.39□□□□□ -1.71
LRRTM2O43300 NPM1P24-201ENST00000428039 894 ntBASIC4.39□□□□□ -1.71
LRRTM2O43300 RPL23AP1-201ENST00000428990 471 ntBASIC4.39□□□□□ -1.71
LRRTM2O43300 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.39□□□□□ -1.71
LRRTM2O43300 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.39□□□□□ -1.71
LRRTM2O43300 MTND4P15-201ENST00000437913 1033 ntBASIC4.39□□□□□ -1.71
LRRTM2O43300 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.39□□□□□ -1.71
LRRTM2O43300 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.39□□□□□ -1.71
LRRTM2O43300 RPL23AP56-201ENST00000460778 453 ntBASIC4.39□□□□□ -1.71
LRRTM2O43300 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.39□□□□□ -1.71
LRRTM2O43300 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRTM2O43300 CDH12P2-201ENST00000504393 298 ntBASIC4.39□□□□□ -1.71
LRRTM2O43300 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.39□□□□□ -1.71
LRRTM2O43300 AC093840.1-201ENST00000511599 336 ntBASIC4.39□□□□□ -1.71
LRRTM2O43300 RN7SKP21-201ENST00000516503 220 ntBASIC4.39□□□□□ -1.71
LRRTM2O43300 AC067904.2-201ENST00000517322 1283 ntBASIC4.39□□□□□ -1.71
LRRTM2O43300 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.39□□□□□ -1.71
LRRTM2O43300 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.39□□□□□ -1.71
LRRTM2O43300 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.39□□□□□ -1.71
LRRTM2O43300 AC103792.1-201ENST00000603591 919 ntBASIC4.39□□□□□ -1.71
LRRTM2O43300 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.39□□□□□ -1.71
LRRTM2O43300 AC074276.2-201ENST00000619891 348 ntBASIC4.39□□□□□ -1.71
LRRTM2O43300 AC019206.1-201ENST00000621938 425 ntBASIC4.39□□□□□ -1.71
LRRTM2O43300 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.39□□□□□ -1.71
LRRTM2O43300 AC091948.2-201ENST00000636510 279 ntBASIC4.39□□□□□ -1.71
LRRTM2O43300 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRTM2O43300 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.39□□□□□ -1.71
LRRTM2O43300 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRRTM2O43300 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
LRRTM2O43300 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRRTM2O43300 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.39□□□□□ -1.71
LRRTM2O43300 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
LRRTM2O43300 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
LRRTM2O43300 AL137100.1-201ENST00000556703 1620 ntBASIC4.39□□□□□ -1.71
LRRTM2O43300 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.38□□□□□ -1.71
LRRTM2O43300 MAPK10-303ENST00000641324 3959 ntBASIC4.38□□□□□ -1.71
LRRTM2O43300 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
LRRTM2O43300 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.38□□□□□ -1.71
LRRTM2O43300 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
LRRTM2O43300 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms