RNA–Protein interactions for RNA: ENST00000428039.1

NPM1P24-201, Transcript of nucleophosmin 1 pseudogene 24, humanhuman

BASIC

Gene NPM1P24, Length 894 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1P24-201ENST00000428039 AEBP2Q6ZN18 517 aaPredicted RBP27.14■■□□□ 1.94
NPM1P24-201ENST00000428039 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
NPM1P24-201ENST00000428039 SENP3Q9H4L4 574 aaPredicted RBP23.04■■□□□ 1.28
NPM1P24-201ENST00000428039 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
NPM1P24-201ENST00000428039 FOXD1Q16676 465 aa21.66■■□□□ 1.06
NPM1P24-201ENST00000428039 POTEDQ86YR6 584 aa20.74■□□□□ 0.91
NPM1P24-201ENST00000428039 MSH5O43196 834 aa20.31■□□□□ 0.84
NPM1P24-201ENST00000428039 PIAS4Q8N2W9 510 aaPredicted RBP20.06■□□□□ 0.8
NPM1P24-201ENST00000428039 PPP6R1Q9UPN7 881 aa19.95■□□□□ 0.78
NPM1P24-201ENST00000428039 PLPPR3Q6T4P5 718 aa19.87■□□□□ 0.77
NPM1P24-201ENST00000428039 ADRA2BP18089 450 aa19.83■□□□□ 0.77
NPM1P24-201ENST00000428039 MAPK8IP2Q13387 824 aaPredicted RBP18.39■□□□□ 0.53
NPM1P24-201ENST00000428039 DMRT2Q9Y5R5 561 aa18.25■□□□□ 0.51
NPM1P24-201ENST00000428039 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
NPM1P24-201ENST00000428039 CACNB1Q02641 598 aaPredicted RBP17.76■□□□□ 0.43
NPM1P24-201ENST00000428039 DCAF8L1A6NGE4 600 aa17.52■□□□□ 0.4
NPM1P24-201ENST00000428039 PPP4R3CPQ6ZMV5 832 aa17.41■□□□□ 0.38
NPM1P24-201ENST00000428039 HOXD11P31277 338 aaPredicted RBP17.4■□□□□ 0.38
NPM1P24-201ENST00000428039 RNF39Q9H2S5 420 aa17.37■□□□□ 0.37
NPM1P24-201ENST00000428039 CNKSR2Q8WXI2 1034 aa17.14■□□□□ 0.33
NPM1P24-201ENST00000428039 RNF216Q9NWF9 866 aaPredicted RBP17.11■□□□□ 0.33
NPM1P24-201ENST00000428039 C1QBPQ07021 282 aaKnown RBP17■□□□□ 0.31
NPM1P24-201ENST00000428039 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
NPM1P24-201ENST00000428039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.24
NPM1P24-201ENST00000428039 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
NPM1P24-201ENST00000428039 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
NPM1P24-201ENST00000428039 U3KPZ7 1027 aaPredicted RBP16.23■□□□□ 0.19
NPM1P24-201ENST00000428039 SPINK5Q9NQ38 1064 aaPredicted RBP16.16■□□□□ 0.18
NPM1P24-201ENST00000428039 POTEHQ6S545 545 aa16.13■□□□□ 0.17
NPM1P24-201ENST00000428039 DSG3P32926 999 aa16.12■□□□□ 0.17
NPM1P24-201ENST00000428039 CAPN15O75808 1086 aa16.07■□□□□ 0.16
NPM1P24-201ENST00000428039 SLC4A2P04920 1241 aa15.82■□□□□ 0.12
NPM1P24-201ENST00000428039 ABCB7O75027 752 aa15.72■□□□□ 0.11
NPM1P24-201ENST00000428039 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
NPM1P24-201ENST00000428039 KCNA4P22459 653 aa15.69■□□□□ 0.1
NPM1P24-201ENST00000428039 ZNF219Q9P2Y4 722 aaPredicted RBP15.59■□□□□ 0.09
NPM1P24-201ENST00000428039 APLP2Q06481 763 aa15.49■□□□□ 0.07
NPM1P24-201ENST00000428039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.41■□□□□ 0.06
NPM1P24-201ENST00000428039 HNRNPUL2Q1KMD3 747 aaKnown RBP15.41■□□□□ 0.06
NPM1P24-201ENST00000428039 SAMD1Q6SPF0 538 aaPredicted RBP15.34■□□□□ 0.05
NPM1P24-201ENST00000428039 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
NPM1P24-201ENST00000428039 CHRDL2Q6WN34 429 aa15.2■□□□□ 0.02
NPM1P24-201ENST00000428039 POLA2Q14181 598 aa15.18■□□□□ 0.02
NPM1P24-201ENST00000428039 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
NPM1P24-201ENST00000428039 ATF5Q9Y2D1 282 aaPredicted RBP14.95□□□□□ -0.02
NPM1P24-201ENST00000428039 SP7Q8TDD2 431 aaPredicted RBP14.88□□□□□ -0.03
NPM1P24-201ENST00000428039 AKT1S1Q96B36 256 aa14.86□□□□□ -0.03
NPM1P24-201ENST00000428039 REM2Q8IYK8 340 aaPredicted RBP14.78□□□□□ -0.04
NPM1P24-201ENST00000428039 PIP4P2Q8N4L2 257 aa14.78□□□□□ -0.04
NPM1P24-201ENST00000428039 OSCARQ8IYS5 282 aa14.75□□□□□ -0.05
NPM1P24-201ENST00000428039 FOXD4L1Q9NU39 408 aa14.7□□□□□ -0.06
NPM1P24-201ENST00000428039 ZBTB12Q9Y330 459 aaPredicted RBP14.7□□□□□ -0.06
NPM1P24-201ENST00000428039 PITPNM1O00562 1244 aa14.66□□□□□ -0.06
NPM1P24-201ENST00000428039 SLC4A1APQ9BWU0 796 aaKnown RBP14.64□□□□□ -0.07
NPM1P24-201ENST00000428039 FXR2P51116 673 aaKnown RBP eCLIP14.6□□□□□ -0.07
NPM1P24-201ENST00000428039 HAX1O00165 279 aa14.59□□□□□ -0.07
NPM1P24-201ENST00000428039 EVX2Q03828 476 aa14.52□□□□□ -0.09
NPM1P24-201ENST00000428039 ZBTB22O15209 634 aa14.48□□□□□ -0.09
NPM1P24-201ENST00000428039 SPDYE2BA6NHP3 402 aa14.28□□□□□ -0.12
NPM1P24-201ENST00000428039 SPDYE6P0CI01 402 aa14.28□□□□□ -0.12
NPM1P24-201ENST00000428039 SPDYE2Q495Y8 402 aa14.28□□□□□ -0.12
NPM1P24-201ENST00000428039 ATXN8OSP0DMR3 200 aa14.24□□□□□ -0.13
NPM1P24-201ENST00000428039 PRKAR2AP13861 404 aaKnown RBP14.24□□□□□ -0.13
NPM1P24-201ENST00000428039 MKRN4PQ13434 485 aaPredicted RBP14.2□□□□□ -0.14
NPM1P24-201ENST00000428039 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
NPM1P24-201ENST00000428039 FBLN2P98095 1184 aa14.18□□□□□ -0.14
NPM1P24-201ENST00000428039 C19orf67A6NJJ6 358 aa14.15□□□□□ -0.14
NPM1P24-201ENST00000428039 SPDYE1Q8NFV5 336 aaPredicted RBP14.13□□□□□ -0.15
NPM1P24-201ENST00000428039 SSUH2Q9Y2M2 353 aa14.09□□□□□ -0.15
NPM1P24-201ENST00000428039 GABBR2O75899 941 aa14.07□□□□□ -0.16
NPM1P24-201ENST00000428039 ZNF692Q9BU19 519 aaPredicted RBP14.06□□□□□ -0.16
NPM1P24-201ENST00000428039 CHADLQ6NUI6 762 aa14.05□□□□□ -0.16
NPM1P24-201ENST00000428039 LHX8Q68G74 356 aa13.96□□□□□ -0.17
NPM1P24-201ENST00000428039 PABPN1Q86U42 306 aaKnown RBP eCLIP13.87□□□□□ -0.19
NPM1P24-201ENST00000428039 PRR29P0C7W0 189 aa13.85□□□□□ -0.19
NPM1P24-201ENST00000428039 POTEIP0CG38 1075 aa13.85□□□□□ -0.19
NPM1P24-201ENST00000428039 CD44P16070 742 aaKnown RBP13.75□□□□□ -0.21
NPM1P24-201ENST00000428039 FARP1Q9Y4F1 1045 aaPredicted RBP13.72□□□□□ -0.21
NPM1P24-201ENST00000428039 ZNF579Q8NAF0 562 aaKnown RBP13.51□□□□□ -0.25
NPM1P24-201ENST00000428039 DCBLD2Q96PD2 775 aa13.51□□□□□ -0.25
NPM1P24-201ENST00000428039 CLCN6P51797 869 aa13.5□□□□□ -0.25
NPM1P24-201ENST00000428039 CREBZFQ9NS37 354 aa13.49□□□□□ -0.25
NPM1P24-201ENST00000428039 ZRANB1Q9UGI0 708 aa13.49□□□□□ -0.25
NPM1P24-201ENST00000428039 GALR2O43603 387 aaPredicted RBP13.45□□□□□ -0.26
NPM1P24-201ENST00000428039 PLSCR2Q9NRY7 297 aa13.45□□□□□ -0.26
NPM1P24-201ENST00000428039 POTEB2H3BUK9 544 aa13.39□□□□□ -0.27
NPM1P24-201ENST00000428039 OTUD5Q96G74 571 aa13.38□□□□□ -0.27
NPM1P24-201ENST00000428039 CSRNP3Q8WYN3 585 aa13.34□□□□□ -0.27
NPM1P24-201ENST00000428039 PHF12Q96QT6 1004 aa13.32□□□□□ -0.28
NPM1P24-201ENST00000428039 PELP1Q8IZL8 1130 aaKnown RBP13.27□□□□□ -0.29
NPM1P24-201ENST00000428039 STAG3Q9UJ98 1225 aa13.27□□□□□ -0.29
NPM1P24-201ENST00000428039 MNX1P50219 401 aaPredicted RBP13.23□□□□□ -0.29
NPM1P24-201ENST00000428039 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
NPM1P24-201ENST00000428039 POTEMA6NI47 508 aa13.17□□□□□ -0.3
NPM1P24-201ENST00000428039 PAK3O75914 559 aaPredicted RBP13.16□□□□□ -0.3
NPM1P24-201ENST00000428039 POTEJP0CG39 1038 aa13.14□□□□□ -0.31
NPM1P24-201ENST00000428039 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
NPM1P24-201ENST00000428039 MS4A3Q96HJ5 214 aa13.11□□□□□ -0.31
NPM1P24-201ENST00000428039 NPM1P06748 294 aaKnown RBP eCLIP13.09□□□□□ -0.31
NPM1P24-201ENST00000428039 ASTLQ6HA08 431 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms