RNA–Protein interactions for RNA: ENST00000428585.5

CARF-208, Transcript of calcium responsive transcription factor, humanhuman

TSL 2 BASIC

Gene CARF, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARF-208ENST00000428585 CHIC1Q5VXU3 224 aa11.18□□□□□ -0.62
CARF-208ENST00000428585 AEBP2Q6ZN18 517 aaPredicted RBP10.95□□□□□ -0.66
CARF-208ENST00000428585 ABCC9O60706 1549 aa10.5□□□□□ -0.73
CARF-208ENST00000428585 NISCHQ9Y2I1 1504 aa10.48□□□□□ -0.73
CARF-208ENST00000428585 DNAJC5BQ9UF47 199 aa10.48□□□□□ -0.73
CARF-208ENST00000428585 DNAJC5Q9H3Z4 198 aa10.26□□□□□ -0.77
CARF-208ENST00000428585 SLC24A1O60721 1099 aa9.98□□□□□ -0.81
CARF-208ENST00000428585 PHF23Q9BUL5 403 aaPredicted RBP9.95□□□□□ -0.82
CARF-208ENST00000428585 CCDC180Q9P1Z9 1646 aa9.87□□□□□ -0.83
CARF-208ENST00000428585 EHMT2Q96KQ7 1210 aa9.87□□□□□ -0.83
CARF-208ENST00000428585 POTEDQ86YR6 584 aa9.75□□□□□ -0.85
CARF-208ENST00000428585 RB1CC1Q8TDY2 1594 aa9.73□□□□□ -0.85
CARF-208ENST00000428585 CECR2Q9BXF3 1484 aa9.56□□□□□ -0.88
CARF-208ENST00000428585 PABPN1Q86U42 306 aaKnown RBP eCLIP9.56□□□□□ -0.88
CARF-208ENST00000428585 UNC13AQ9UPW8 1703 aa9.53□□□□□ -0.88
CARF-208ENST00000428585 CC2D2AQ9P2K1 1620 aa9.5□□□□□ -0.89
CARF-208ENST00000428585 PLPPR3Q6T4P5 718 aa9.48□□□□□ -0.89
CARF-208ENST00000428585 CUX2O14529 1486 aa9.47□□□□□ -0.89
CARF-208ENST00000428585 NACADO15069 1562 aa9.46□□□□□ -0.89
CARF-208ENST00000428585 BICRAQ9NZM4 1560 aa9.45□□□□□ -0.9
CARF-208ENST00000428585 TRIM41Q8WV44 630 aa9.43□□□□□ -0.9
CARF-208ENST00000428585 KCNA4P22459 653 aa9.35□□□□□ -0.91
CARF-208ENST00000428585 SHROOM4Q9ULL8 1493 aa9.33□□□□□ -0.92
CARF-208ENST00000428585 CSRNP3Q8WYN3 585 aa9.32□□□□□ -0.92
CARF-208ENST00000428585 EIF4G1Q04637 1599 aaKnown RBP9.28□□□□□ -0.92
CARF-208ENST00000428585 RTN4Q9NQC3 1192 aaKnown RBP9.27□□□□□ -0.93
CARF-208ENST00000428585 AMER1Q5JTC6 1135 aaPredicted RBP9.24□□□□□ -0.93
CARF-208ENST00000428585 ERCC6Q03468 1493 aa9.14□□□□□ -0.95
CARF-208ENST00000428585 MYO15BQ96JP2 1530 aa9.09□□□□□ -0.95
CARF-208ENST00000428585 SLC4A1APQ9BWU0 796 aaKnown RBP9.05□□□□□ -0.96
CARF-208ENST00000428585 DCAF8L2P0C7V8 631 aa9□□□□□ -0.97
CARF-208ENST00000428585 THOC2Q8NI27 1593 aaKnown RBP8.96□□□□□ -0.97
CARF-208ENST00000428585 NCBP3Q53F19 620 aaKnown RBP8.95□□□□□ -0.98
CARF-208ENST00000428585 ILDR1Q86SU0 546 aaPredicted RBP8.9□□□□□ -0.99
CARF-208ENST00000428585 BAZ1AQ9NRL2 1556 aaPredicted RBP8.87□□□□□ -0.99
CARF-208ENST00000428585 SCRIBQ14160 1630 aa8.86□□□□□ -0.99
CARF-208ENST00000428585 ADRA2BP18089 450 aa8.86□□□□□ -0.99
CARF-208ENST00000428585 RIMBP3CA6NJZ7 1639 aa8.86□□□□□ -0.99
CARF-208ENST00000428585 RIMBP3BA6NNM3 1639 aa8.86□□□□□ -0.99
CARF-208ENST00000428585 RIMBP3Q9UFD9 1639 aa8.86□□□□□ -0.99
CARF-208ENST00000428585 SENP3Q9H4L4 574 aaPredicted RBP8.86□□□□□ -0.99
CARF-208ENST00000428585 NESP48681 1621 aa8.78□□□□□ -1
CARF-208ENST00000428585 SMARCA2P51531 1590 aa8.77□□□□□ -1.01
CARF-208ENST00000428585 OSCARQ8IYS5 282 aa8.77□□□□□ -1.01
CARF-208ENST00000428585 TRHP20396 242 aaPredicted RBP8.76□□□□□ -1.01
CARF-208ENST00000428585 DAXXQ9UER7 740 aaPredicted RBP8.75□□□□□ -1.01
CARF-208ENST00000428585 KIF21AQ7Z4S6 1674 aa8.73□□□□□ -1.01
CARF-208ENST00000428585 ARHGEF11O15085 1522 aa8.72□□□□□ -1.01
CARF-208ENST00000428585 NCAPD3P42695 1498 aa8.7□□□□□ -1.02
CARF-208ENST00000428585 LAMC3Q9Y6N6 1575 aa8.68□□□□□ -1.02
CARF-208ENST00000428585 DCAF1Q9Y4B6 1507 aa8.67□□□□□ -1.02
CARF-208ENST00000428585 WDR62O43379 1518 aa8.64□□□□□ -1.03
CARF-208ENST00000428585 ZBTB22O15209 634 aa8.63□□□□□ -1.03
CARF-208ENST00000428585 HMGXB3Q12766 1538 aa8.63□□□□□ -1.03
CARF-208ENST00000428585 PRKCSHP14314 528 aaPredicted RBP8.61□□□□□ -1.03
CARF-208ENST00000428585 MRC2Q9UBG0 1479 aa8.61□□□□□ -1.03
CARF-208ENST00000428585 PDS5BQ9NTI5 1447 aa8.6□□□□□ -1.03
CARF-208ENST00000428585 PPP6R1Q9UPN7 881 aa8.58□□□□□ -1.04
CARF-208ENST00000428585 ARAP1Q96P48 1450 aa8.58□□□□□ -1.04
CARF-208ENST00000428585 CYB5RLQ6IPT4 315 aa8.57□□□□□ -1.04
CARF-208ENST00000428585 ATAD2BQ9ULI0 1458 aa8.55□□□□□ -1.04
CARF-208ENST00000428585 ZCCHC6Q5VYS8 1495 aaKnown RBP8.55□□□□□ -1.04
CARF-208ENST00000428585 BCANQ96GW7 911 aa8.52□□□□□ -1.05
CARF-208ENST00000428585 TAOK2Q9UL54 1235 aa8.51□□□□□ -1.05
CARF-208ENST00000428585 PPP4R3CPQ6ZMV5 832 aa8.47□□□□□ -1.05
CARF-208ENST00000428585 ARXQ96QS3 562 aa8.47□□□□□ -1.05
CARF-208ENST00000428585 ERCC6L2Q5T890 1561 aa8.47□□□□□ -1.05
CARF-208ENST00000428585 PLCB2Q00722 1185 aa8.46□□□□□ -1.05
CARF-208ENST00000428585 LMTK3Q96Q04 1460 aa8.45□□□□□ -1.06
CARF-208ENST00000428585 RSF1Q96T23 1441 aaPredicted RBP8.44□□□□□ -1.06
CARF-208ENST00000428585 BAZ1BQ9UIG0 1483 aaKnown RBP8.44□□□□□ -1.06
CARF-208ENST00000428585 FOXD1Q16676 465 aa8.43□□□□□ -1.06
CARF-208ENST00000428585 NPM3O75607 178 aaKnown RBP8.41□□□□□ -1.06
CARF-208ENST00000428585 CEP164Q9UPV0 1460 aa8.4□□□□□ -1.06
CARF-208ENST00000428585 SOCS7O14512 581 aa8.4□□□□□ -1.07
CARF-208ENST00000428585 FBXO41Q8TF61 875 aa8.4□□□□□ -1.07
CARF-208ENST00000428585 SMARCA4P51532 1647 aa8.39□□□□□ -1.07
CARF-208ENST00000428585 TIMELESSQ9UNS1 1208 aa8.38□□□□□ -1.07
CARF-208ENST00000428585 CHD1O14646 1710 aa8.38□□□□□ -1.07
CARF-208ENST00000428585 CADPSQ9ULU8 1353 aa8.37□□□□□ -1.07
CARF-208ENST00000428585 FKBP8Q14318 412 aa8.36□□□□□ -1.07
CARF-208ENST00000428585 TPRNQ4KMQ1 711 aa8.35□□□□□ -1.07
CARF-208ENST00000428585 KDM4FA0A1W2PPD8 638 aa8.34□□□□□ -1.07
CARF-208ENST00000428585 HAP1P54257 671 aaPredicted RBP8.34□□□□□ -1.07
CARF-208ENST00000428585 HECW2Q9P2P5 1572 aa8.33□□□□□ -1.08
CARF-208ENST00000428585 PEG3Q9GZU2 1588 aa8.33□□□□□ -1.08
CARF-208ENST00000428585 FOXD4L1Q9NU39 408 aa8.32□□□□□ -1.08
CARF-208ENST00000428585 FANCD2Q9BXW9 1451 aa8.3□□□□□ -1.08
CARF-208ENST00000428585 URB2Q14146 1524 aaKnown RBP8.29□□□□□ -1.08
CARF-208ENST00000428585 ZNF608Q9ULD9 1512 aaPredicted RBP8.29□□□□□ -1.08
CARF-208ENST00000428585 TULP1O00294 542 aaPredicted RBP8.29□□□□□ -1.08
CARF-208ENST00000428585 EIF4G3O43432 1585 aaKnown RBP8.28□□□□□ -1.08
CARF-208ENST00000428585 IFT140Q96RY7 1462 aa8.27□□□□□ -1.09
CARF-208ENST00000428585 KIF13AQ9H1H9 1805 aa8.27□□□□□ -1.09
CARF-208ENST00000428585 ILDR2Q71H61 639 aa8.26□□□□□ -1.09
CARF-208ENST00000428585 CLASP1Q7Z460 1538 aa8.26□□□□□ -1.09
CARF-208ENST00000428585 VSIG10Q8N0Z9 540 aa8.23□□□□□ -1.09
CARF-208ENST00000428585 HOMEZQ8IX15 550 aa8.22□□□□□ -1.09
CARF-208ENST00000428585 DISP3Q9P2K9 1392 aa8.19□□□□□ -1.1
CARF-208ENST00000428585 SYNJ2O15056 1496 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms