RNA–Protein interactions for RNA: ENST00000504393.1

CDH12P2-201, Transcript of cadherin 12 pseudogene 2, humanhuman

BASIC

Gene CDH12P2, Length 298 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P2-201ENST00000504393 AEBP2Q6ZN18 517 aaPredicted RBP20.81■□□□□ 0.92
CDH12P2-201ENST00000504393 CHIC1Q5VXU3 224 aa19.74■□□□□ 0.75
CDH12P2-201ENST00000504393 SENP3Q9H4L4 574 aaPredicted RBP17.83■□□□□ 0.44
CDH12P2-201ENST00000504393 PHF23Q9BUL5 403 aaPredicted RBP17.53■□□□□ 0.4
CDH12P2-201ENST00000504393 FOXD1Q16676 465 aa16.56■□□□□ 0.24
CDH12P2-201ENST00000504393 PLPPR3Q6T4P5 718 aa15.76■□□□□ 0.11
CDH12P2-201ENST00000504393 MSH5O43196 834 aa15.61■□□□□ 0.09
CDH12P2-201ENST00000504393 PIAS4Q8N2W9 510 aaPredicted RBP15.46■□□□□ 0.07
CDH12P2-201ENST00000504393 PPP6R1Q9UPN7 881 aa15.39■□□□□ 0.05
CDH12P2-201ENST00000504393 ADRA2BP18089 450 aa15.32■□□□□ 0.04
CDH12P2-201ENST00000504393 POTEDQ86YR6 584 aa15.28■□□□□ 0.04
CDH12P2-201ENST00000504393 SCAF1Q9H7N4 1312 aaKnown RBP14.13□□□□□ -0.15
CDH12P2-201ENST00000504393 DMRT2Q9Y5R5 561 aa14.12□□□□□ -0.15
CDH12P2-201ENST00000504393 MAPK8IP2Q13387 824 aaPredicted RBP14.08□□□□□ -0.16
CDH12P2-201ENST00000504393 PPP4R3CPQ6ZMV5 832 aa13.75□□□□□ -0.21
CDH12P2-201ENST00000504393 HOXD11P31277 338 aaPredicted RBP13.59□□□□□ -0.23
CDH12P2-201ENST00000504393 CNKSR2Q8WXI2 1034 aa13.55□□□□□ -0.24
CDH12P2-201ENST00000504393 RNF216Q9NWF9 866 aaPredicted RBP13.46□□□□□ -0.25
CDH12P2-201ENST00000504393 DCAF8L1A6NGE4 600 aa13.42□□□□□ -0.26
CDH12P2-201ENST00000504393 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
CDH12P2-201ENST00000504393 CACNB1Q02641 598 aaPredicted RBP13.35□□□□□ -0.27
CDH12P2-201ENST00000504393 KCNA4P22459 653 aa13.3□□□□□ -0.28
CDH12P2-201ENST00000504393 RNF39Q9H2S5 420 aa13.29□□□□□ -0.28
CDH12P2-201ENST00000504393 NCBP3Q53F19 620 aaKnown RBP13.25□□□□□ -0.29
CDH12P2-201ENST00000504393 DNAJC5BQ9UF47 199 aa13.24□□□□□ -0.29
CDH12P2-201ENST00000504393 C1QBPQ07021 282 aaKnown RBP13.12□□□□□ -0.31
CDH12P2-201ENST00000504393 NPM3O75607 178 aaKnown RBP13.02□□□□□ -0.33
CDH12P2-201ENST00000504393 SLC4A1APQ9BWU0 796 aaKnown RBP12.89□□□□□ -0.35
CDH12P2-201ENST00000504393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.88□□□□□ -0.35
CDH12P2-201ENST00000504393 CSRNP3Q8WYN3 585 aa12.82□□□□□ -0.36
CDH12P2-201ENST00000504393 U3KPZ7 1027 aaPredicted RBP12.62□□□□□ -0.39
CDH12P2-201ENST00000504393 SLC4A2P04920 1241 aa12.45□□□□□ -0.42
CDH12P2-201ENST00000504393 SPINK5Q9NQ38 1064 aaPredicted RBP12.41□□□□□ -0.42
CDH12P2-201ENST00000504393 CAPN15O75808 1086 aa12.4□□□□□ -0.42
CDH12P2-201ENST00000504393 DSG3P32926 999 aa12.4□□□□□ -0.42
CDH12P2-201ENST00000504393 APLP2Q06481 763 aa12.35□□□□□ -0.43
CDH12P2-201ENST00000504393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.31□□□□□ -0.44
CDH12P2-201ENST00000504393 HNRNPUL2Q1KMD3 747 aaKnown RBP12.31□□□□□ -0.44
CDH12P2-201ENST00000504393 ZNF219Q9P2Y4 722 aaPredicted RBP12.25□□□□□ -0.45
CDH12P2-201ENST00000504393 SAMD1Q6SPF0 538 aaPredicted RBP12.22□□□□□ -0.45
CDH12P2-201ENST00000504393 ZBTB22O15209 634 aa12.19□□□□□ -0.46
CDH12P2-201ENST00000504393 TRHP20396 242 aaPredicted RBP12.17□□□□□ -0.46
CDH12P2-201ENST00000504393 FOXD4L1Q9NU39 408 aa12.1□□□□□ -0.47
CDH12P2-201ENST00000504393 SLC24A1O60721 1099 aa12.09□□□□□ -0.47
CDH12P2-201ENST00000504393 MYCNP04198 464 aaPredicted RBP12.08□□□□□ -0.48
CDH12P2-201ENST00000504393 ABCB7O75027 752 aa12.07□□□□□ -0.48
CDH12P2-201ENST00000504393 AMER1Q5JTC6 1135 aaPredicted RBP12.03□□□□□ -0.48
CDH12P2-201ENST00000504393 POTEHQ6S545 545 aa11.97□□□□□ -0.49
CDH12P2-201ENST00000504393 RBM42Q9BTD8 480 aaKnown RBP11.89□□□□□ -0.51
CDH12P2-201ENST00000504393 RTN4Q9NQC3 1192 aaKnown RBP11.88□□□□□ -0.51
CDH12P2-201ENST00000504393 POLA2Q14181 598 aa11.84□□□□□ -0.51
CDH12P2-201ENST00000504393 ATF5Q9Y2D1 282 aaPredicted RBP11.71□□□□□ -0.53
CDH12P2-201ENST00000504393 ZBTB12Q9Y330 459 aaPredicted RBP11.71□□□□□ -0.53
CDH12P2-201ENST00000504393 ATXN8OSP0DMR3 200 aa11.67□□□□□ -0.54
CDH12P2-201ENST00000504393 FKBP8Q14318 412 aa11.6□□□□□ -0.55
CDH12P2-201ENST00000504393 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
CDH12P2-201ENST00000504393 AKT1S1Q96B36 256 aa11.58□□□□□ -0.56
CDH12P2-201ENST00000504393 OSCARQ8IYS5 282 aa11.48□□□□□ -0.57
CDH12P2-201ENST00000504393 REM2Q8IYK8 340 aaPredicted RBP11.42□□□□□ -0.58
CDH12P2-201ENST00000504393 FBLN2P98095 1184 aa11.33□□□□□ -0.6
CDH12P2-201ENST00000504393 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
CDH12P2-201ENST00000504393 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
CDH12P2-201ENST00000504393 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
CDH12P2-201ENST00000504393 PITPNM1O00562 1244 aa11.29□□□□□ -0.6
CDH12P2-201ENST00000504393 PIP4P2Q8N4L2 257 aa11.28□□□□□ -0.6
CDH12P2-201ENST00000504393 FXR2P51116 673 aaKnown RBP eCLIP11.25□□□□□ -0.61
CDH12P2-201ENST00000504393 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
CDH12P2-201ENST00000504393 SP7Q8TDD2 431 aaPredicted RBP11.2□□□□□ -0.62
CDH12P2-201ENST00000504393 SSUH2Q9Y2M2 353 aa11.17□□□□□ -0.62
CDH12P2-201ENST00000504393 SPDYE1Q8NFV5 336 aaPredicted RBP11.12□□□□□ -0.63
CDH12P2-201ENST00000504393 ZNF692Q9BU19 519 aaPredicted RBP11.1□□□□□ -0.63
CDH12P2-201ENST00000504393 FBXO3Q9UK99 471 aa11.1□□□□□ -0.63
CDH12P2-201ENST00000504393 HAX1O00165 279 aa11.07□□□□□ -0.64
CDH12P2-201ENST00000504393 PLCB2Q00722 1185 aa11.01□□□□□ -0.65
CDH12P2-201ENST00000504393 CLEC11AQ9Y240 323 aa11.01□□□□□ -0.65
CDH12P2-201ENST00000504393 PRKAR2AP13861 404 aaKnown RBP10.99□□□□□ -0.65
CDH12P2-201ENST00000504393 PABPN1Q86U42 306 aaKnown RBP eCLIP10.93□□□□□ -0.66
CDH12P2-201ENST00000504393 EVX2Q03828 476 aa10.9□□□□□ -0.66
CDH12P2-201ENST00000504393 C19orf67A6NJJ6 358 aa10.89□□□□□ -0.67
CDH12P2-201ENST00000504393 SPDYE4A6NLX3 237 aa10.88□□□□□ -0.67
CDH12P2-201ENST00000504393 HAP1P54257 671 aaPredicted RBP10.87□□□□□ -0.67
CDH12P2-201ENST00000504393 PRR29P0C7W0 189 aa10.86□□□□□ -0.67
CDH12P2-201ENST00000504393 BCANQ96GW7 911 aa10.85□□□□□ -0.67
CDH12P2-201ENST00000504393 DCAF8L2P0C7V8 631 aa10.83□□□□□ -0.68
CDH12P2-201ENST00000504393 VASPP50552 380 aaPredicted RBP10.82□□□□□ -0.68
CDH12P2-201ENST00000504393 CHADLQ6NUI6 762 aa10.81□□□□□ -0.68
CDH12P2-201ENST00000504393 VSIG10Q8N0Z9 540 aa10.76□□□□□ -0.69
CDH12P2-201ENST00000504393 PROM2Q8N271 834 aa10.75□□□□□ -0.69
CDH12P2-201ENST00000504393 GABBR2O75899 941 aa10.71□□□□□ -0.69
CDH12P2-201ENST00000504393 FARP1Q9Y4F1 1045 aaPredicted RBP10.71□□□□□ -0.69
CDH12P2-201ENST00000504393 STAG3Q9UJ98 1225 aa10.7□□□□□ -0.7
CDH12P2-201ENST00000504393 IFNLR1Q8IU57 520 aaPredicted RBP10.67□□□□□ -0.7
CDH12P2-201ENST00000504393 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.67□□□□□ -0.7
CDH12P2-201ENST00000504393 CD44P16070 742 aaKnown RBP10.65□□□□□ -0.7
CDH12P2-201ENST00000504393 CLCN6P51797 869 aa10.65□□□□□ -0.7
CDH12P2-201ENST00000504393 TAOK2Q9UL54 1235 aa10.64□□□□□ -0.71
CDH12P2-201ENST00000504393 PKD2Q13563 968 aa10.61□□□□□ -0.71
CDH12P2-201ENST00000504393 CREBZFQ9NS37 354 aa10.59□□□□□ -0.71
CDH12P2-201ENST00000504393 BBXQ8WY36 941 aaPredicted RBP10.58□□□□□ -0.72
CDH12P2-201ENST00000504393 PRKCSHP14314 528 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms