Protein–RNA interactions for Protein: Q9BYR0

KRTAP4-7, Keratin-associated protein 4-7, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-7Q9BYR0 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 DMXL2-201ENST00000251076 10672 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 ZBTB20-203ENST00000462705 3740 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 FAM193A-210ENST00000545951 3987 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 GSTCD-211ENST00000515279 4273 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 CCDC80-202ENST00000439685 3557 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 LINC01347-202ENST00000627498 3841 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 ZFP57-201ENST00000376881 1359 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 ADGRE2-212ENST00000601345 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 STAG3-201ENST00000317296 4198 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 ZNF780A-201ENST00000340963 3674 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 CPHL1P-201ENST00000461341 3407 ntBASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 PRRG3-201ENST00000370353 5977 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC3.37□□□□□ -1.87
KRTAP4-7Q9BYR0 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 FCRL4-201ENST00000271532 3459 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 SEMA4D-202ENST00000356444 4503 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 SLAMF8-201ENST00000289707 2996 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 BRAFP1-201ENST00000445336 2703 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 AC011453.1-201ENST00000597619 2239 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 FAM161B-201ENST00000286544 4078 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 CNOT4-212ENST00000541284 3563 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 KIR3DX1-205ENST00000610811 3325 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 ACTR2-201ENST00000260641 3861 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 SEC61A2-204ENST00000379020 2252 ntTSL 5 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 PDE4D-207ENST00000405755 2294 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 SLC24A4-201ENST00000393265 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 REN-202ENST00000638118 1488 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 ZNF343-201ENST00000278772 3632 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 AC132825.4-201ENST00000582527 3644 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 MEIS1-212ENST00000495021 2836 ntTSL 2 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 PARP8-219ENST00000514067 2829 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 RPGR-202ENST00000339363 3686 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 AP002490.1-201ENST00000502284 4233 ntTSL 2 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 SPDYE16-202ENST00000632547 3434 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 AL133492.1-201ENST00000617854 3955 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 TANGO6-201ENST00000261778 4816 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 LINC00930-202ENST00000557075 1541 ntTSL 2 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 SCMH1-203ENST00000361191 2906 ntTSL 5 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 SLC39A9-201ENST00000031146 5192 ntTSL 5 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 PLCD4-203ENST00000432688 3225 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 SLC12A6-203ENST00000397702 4096 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 ARL5C-201ENST00000269586 540 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 EMP3-201ENST00000270221 876 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 RNU6-446P-201ENST00000362827 106 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 SNORD115-14-201ENST00000363090 81 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 SNORA71E-201ENST00000365032 132 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 RNU6-701P-201ENST00000384059 107 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 Y_RNA.498-201ENST00000384460 102 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 RNU6-159P-201ENST00000391080 106 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 RNU6-1250P-201ENST00000391218 107 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 FXYD5-202ENST00000392217 632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 PRELID1P1-201ENST00000403549 660 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 AC138623.1-201ENST00000418060 216 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 AL353621.1-201ENST00000418219 243 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 RPL34P27-201ENST00000428810 349 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 AC108868.1-201ENST00000431411 554 ntTSL 4 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 KRTAP19-10P-201ENST00000445258 187 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 CEACAM22P-203ENST00000455455 545 ntTSL 4 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 RN7SL417P-201ENST00000459938 265 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 RPL23AP64-201ENST00000469465 435 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 GAPDHP60-201ENST00000513846 995 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 RNU6-240P-201ENST00000516098 97 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 RNA5SP230-201ENST00000517039 122 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 IGLV3-29-201ENST00000520084 244 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 AC022695.1-201ENST00000522089 237 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 AC109635.2-202ENST00000529219 500 ntTSL 3 BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 AC027369.4-201ENST00000534243 816 ntBASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 BCAT1-204ENST00000538118 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
KRTAP4-7Q9BYR0 AC026826.3-201ENST00000561747 158 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms