Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.86□□□□□ -1.63
O00370 BTF3P9-201ENST00000418784 283 ntBASIC4.86□□□□□ -1.63
O00370 RPA2P2-201ENST00000419698 796 ntBASIC4.86□□□□□ -1.63
O00370 AC073508.1-201ENST00000428866 656 ntBASIC4.86□□□□□ -1.63
O00370 PTP4A1P3-201ENST00000433661 420 ntBASIC4.86□□□□□ -1.63
O00370 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.86□□□□□ -1.63
O00370 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.86□□□□□ -1.63
O00370 AC092013.1-201ENST00000438795 332 ntBASIC4.86□□□□□ -1.63
O00370 AL357520.1-201ENST00000441557 453 ntBASIC4.86□□□□□ -1.63
O00370 AC245517.2-201ENST00000442890 346 ntBASIC4.86□□□□□ -1.63
O00370 AC011753.3-201ENST00000443436 406 ntBASIC4.86□□□□□ -1.63
O00370 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.86□□□□□ -1.63
O00370 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.86□□□□□ -1.63
O00370 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.86□□□□□ -1.63
O00370 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.86□□□□□ -1.63
O00370 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
O00370 HMGB1P3-201ENST00000502802 616 ntBASIC4.86□□□□□ -1.63
O00370 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.86□□□□□ -1.63
O00370 AC093770.1-201ENST00000511559 571 ntBASIC4.86□□□□□ -1.63
O00370 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.86□□□□□ -1.63
O00370 RNA5SP446-201ENST00000515955 82 ntBASIC4.86□□□□□ -1.63
O00370 RNU6-347P-201ENST00000516658 105 ntBASIC4.86□□□□□ -1.63
O00370 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
O00370 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.86□□□□□ -1.63
O00370 AC137768.1-201ENST00000549998 553 ntBASIC4.86□□□□□ -1.63
O00370 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.86□□□□□ -1.63
O00370 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.86□□□□□ -1.63
O00370 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.86□□□□□ -1.63
O00370 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.86□□□□□ -1.63
O00370 PSMA6P4-201ENST00000603247 718 ntBASIC4.86□□□□□ -1.63
O00370 AC103798.2-201ENST00000624292 632 ntBASIC4.86□□□□□ -1.63
O00370 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.86□□□□□ -1.63
O00370 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.86□□□□□ -1.63
O00370 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
O00370 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
O00370 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.86□□□□□ -1.63
O00370 AC090971.4-201ENST00000560291 1800 ntBASIC4.86□□□□□ -1.63
O00370 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
O00370 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.85□□□□□ -1.63
O00370 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
O00370 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.85□□□□□ -1.63
O00370 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
O00370 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
O00370 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
O00370 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
O00370 RNU6-532P-201ENST00000384318 107 ntBASIC4.85□□□□□ -1.63
O00370 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
O00370 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
O00370 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.85□□□□□ -1.63
O00370 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
O00370 EIF4A1P3-201ENST00000411521 244 ntBASIC4.85□□□□□ -1.63
O00370 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
O00370 AC023141.6-201ENST00000429418 337 ntBASIC4.85□□□□□ -1.63
O00370 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.85□□□□□ -1.63
O00370 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
O00370 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.85□□□□□ -1.63
O00370 UBA52P3-201ENST00000491303 382 ntBASIC4.85□□□□□ -1.63
O00370 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.85□□□□□ -1.63
O00370 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.85□□□□□ -1.63
O00370 RNU6-467P-201ENST00000517027 110 ntBASIC4.85□□□□□ -1.63
O00370 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.85□□□□□ -1.63
O00370 MYL12AP1-201ENST00000518490 515 ntBASIC4.85□□□□□ -1.63
O00370 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.85□□□□□ -1.63
O00370 OR4R2P-201ENST00000530815 597 ntBASIC4.85□□□□□ -1.63
O00370 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.85□□□□□ -1.63
O00370 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.85□□□□□ -1.63
O00370 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.85□□□□□ -1.63
O00370 AC023762.1-201ENST00000603280 584 ntBASIC4.85□□□□□ -1.63
O00370 AL671309.1-201ENST00000603750 544 ntBASIC4.85□□□□□ -1.63
O00370 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.85□□□□□ -1.63
O00370 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.85□□□□□ -1.63
O00370 MIR7154-201ENST00000620673 73 ntBASIC4.85□□□□□ -1.63
O00370 AP006248.3-201ENST00000623580 594 ntBASIC4.85□□□□□ -1.63
O00370 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
O00370 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
O00370 DHX40P1-201ENST00000588725 1412 ntBASIC4.85□□□□□ -1.63
O00370 AC012618.3-205ENST00000637896 1496 ntBASIC4.85□□□□□ -1.63
O00370 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
O00370 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
O00370 AC005332.5-201ENST00000591222 2919 ntBASIC4.85□□□□□ -1.63
O00370 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.85□□□□□ -1.63
O00370 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
O00370 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.84□□□□□ -1.63
O00370 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
O00370 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
O00370 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
O00370 DDX18P3-201ENST00000404856 2007 ntBASIC4.84□□□□□ -1.63
O00370 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
O00370 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
O00370 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
O00370 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
O00370 RNA5SP505-201ENST00000364748 108 ntBASIC4.84□□□□□ -1.63
O00370 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
O00370 RPS16P5-201ENST00000406501 404 ntBASIC4.84□□□□□ -1.63
O00370 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.84□□□□□ -1.63
O00370 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.84□□□□□ -1.63
O00370 Y_RNA.625-201ENST00000411256 107 ntBASIC4.84□□□□□ -1.63
O00370 AL160275.2-201ENST00000412010 394 ntBASIC4.84□□□□□ -1.63
O00370 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.84□□□□□ -1.63
O00370 AC092570.3-201ENST00000420113 693 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms