RNA–Protein interactions for RNA: ENST00000473938.1

LINC02050-201, Transcript of long intergenic non-protein coding RNA 2050, humanhuman

TSL 3 BASIC

Gene LINC02050, Length 712 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02050-201ENST00000473938 AEBP2Q6ZN18 517 aaPredicted RBP28.19■■■□□ 2.1
LINC02050-201ENST00000473938 CHIC1Q5VXU3 224 aa26.56■■□□□ 1.84
LINC02050-201ENST00000473938 SENP3Q9H4L4 574 aaPredicted RBP24.13■■□□□ 1.45
LINC02050-201ENST00000473938 PHF23Q9BUL5 403 aaPredicted RBP23.68■■□□□ 1.38
LINC02050-201ENST00000473938 POTEDQ86YR6 584 aa23.66■■□□□ 1.38
LINC02050-201ENST00000473938 FOXD1Q16676 465 aa22.76■■□□□ 1.23
LINC02050-201ENST00000473938 MSH5O43196 834 aa21.72■■□□□ 1.07
LINC02050-201ENST00000473938 PLPPR3Q6T4P5 718 aa21.3■■□□□ 1
LINC02050-201ENST00000473938 PIAS4Q8N2W9 510 aaPredicted RBP20.89■□□□□ 0.93
LINC02050-201ENST00000473938 PPP6R1Q9UPN7 881 aa20.74■□□□□ 0.91
LINC02050-201ENST00000473938 ADRA2BP18089 450 aa20.68■□□□□ 0.9
LINC02050-201ENST00000473938 CACNB1Q02641 598 aaPredicted RBP19.52■□□□□ 0.72
LINC02050-201ENST00000473938 DMRT2Q9Y5R5 561 aa18.96■□□□□ 0.63
LINC02050-201ENST00000473938 MAPK8IP2Q13387 824 aaPredicted RBP18.93■□□□□ 0.62
LINC02050-201ENST00000473938 SCAF1Q9H7N4 1312 aaKnown RBP18.9■□□□□ 0.62
LINC02050-201ENST00000473938 PPP4R3CPQ6ZMV5 832 aa18.7■□□□□ 0.58
LINC02050-201ENST00000473938 RNF39Q9H2S5 420 aa18.46■□□□□ 0.55
LINC02050-201ENST00000473938 CNKSR2Q8WXI2 1034 aa18.31■□□□□ 0.52
LINC02050-201ENST00000473938 DCAF8L1A6NGE4 600 aa18.26■□□□□ 0.51
LINC02050-201ENST00000473938 POTEHQ6S545 545 aa18.24■□□□□ 0.51
LINC02050-201ENST00000473938 HOXD11P31277 338 aaPredicted RBP18.18■□□□□ 0.5
LINC02050-201ENST00000473938 RNF216Q9NWF9 866 aaPredicted RBP18.09■□□□□ 0.49
LINC02050-201ENST00000473938 C1QBPQ07021 282 aaKnown RBP18.05■□□□□ 0.48
LINC02050-201ENST00000473938 NCBP3Q53F19 620 aaKnown RBP18.03■□□□□ 0.48
LINC02050-201ENST00000473938 NPM3O75607 178 aaKnown RBP17.79■□□□□ 0.44
LINC02050-201ENST00000473938 KCNA4P22459 653 aa17.63■□□□□ 0.41
LINC02050-201ENST00000473938 DNAJC5BQ9UF47 199 aa17.51■□□□□ 0.39
LINC02050-201ENST00000473938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.36
LINC02050-201ENST00000473938 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
LINC02050-201ENST00000473938 SLC4A2P04920 1241 aa16.95■□□□□ 0.3
LINC02050-201ENST00000473938 DSG3P32926 999 aa16.84■□□□□ 0.29
LINC02050-201ENST00000473938 SLC4A1APQ9BWU0 796 aaKnown RBP16.68■□□□□ 0.26
LINC02050-201ENST00000473938 SPINK5Q9NQ38 1064 aaPredicted RBP16.66■□□□□ 0.26
LINC02050-201ENST00000473938 CAPN15O75808 1086 aa16.61■□□□□ 0.25
LINC02050-201ENST00000473938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.54■□□□□ 0.24
LINC02050-201ENST00000473938 HNRNPUL2Q1KMD3 747 aaKnown RBP16.54■□□□□ 0.24
LINC02050-201ENST00000473938 APLP2Q06481 763 aa16.5■□□□□ 0.23
LINC02050-201ENST00000473938 SAMD1Q6SPF0 538 aaPredicted RBP16.46■□□□□ 0.23
LINC02050-201ENST00000473938 MYCNP04198 464 aaPredicted RBP16.45■□□□□ 0.22
LINC02050-201ENST00000473938 SP7Q8TDD2 431 aaPredicted RBP16.44■□□□□ 0.22
LINC02050-201ENST00000473938 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
LINC02050-201ENST00000473938 FOXD4L1Q9NU39 408 aa16.39■□□□□ 0.21
LINC02050-201ENST00000473938 ZNF219Q9P2Y4 722 aaPredicted RBP16.38■□□□□ 0.21
LINC02050-201ENST00000473938 CHRDL2Q6WN34 429 aa16.28■□□□□ 0.2
LINC02050-201ENST00000473938 ABCB7O75027 752 aa16.26■□□□□ 0.19
LINC02050-201ENST00000473938 ZBTB22O15209 634 aa16.23■□□□□ 0.19
LINC02050-201ENST00000473938 ATF5Q9Y2D1 282 aaPredicted RBP16.06■□□□□ 0.16
LINC02050-201ENST00000473938 POLA2Q14181 598 aa16■□□□□ 0.15
LINC02050-201ENST00000473938 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
LINC02050-201ENST00000473938 ATXN8OSP0DMR3 200 aa15.87■□□□□ 0.13
LINC02050-201ENST00000473938 ZBTB12Q9Y330 459 aaPredicted RBP15.7■□□□□ 0.1
LINC02050-201ENST00000473938 HAX1O00165 279 aa15.68■□□□□ 0.1
LINC02050-201ENST00000473938 CSRNP3Q8WYN3 585 aa15.64■□□□□ 0.09
LINC02050-201ENST00000473938 PIP4P2Q8N4L2 257 aa15.63■□□□□ 0.09
LINC02050-201ENST00000473938 PLSCR2Q9NRY7 297 aa15.61■□□□□ 0.09
LINC02050-201ENST00000473938 EHMT2Q96KQ7 1210 aa15.55■□□□□ 0.08
LINC02050-201ENST00000473938 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
LINC02050-201ENST00000473938 EVX2Q03828 476 aa15.49■□□□□ 0.07
LINC02050-201ENST00000473938 FBLN2P98095 1184 aa15.4■□□□□ 0.06
LINC02050-201ENST00000473938 AKT1S1Q96B36 256 aa15.4■□□□□ 0.06
LINC02050-201ENST00000473938 LHX8Q68G74 356 aa15.39■□□□□ 0.05
LINC02050-201ENST00000473938 MKRN4PQ13434 485 aaPredicted RBP15.34■□□□□ 0.05
LINC02050-201ENST00000473938 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
LINC02050-201ENST00000473938 FXR2P51116 673 aaKnown RBP eCLIP15.28■□□□□ 0.04
LINC02050-201ENST00000473938 SPDYE2BA6NHP3 402 aa15.24■□□□□ 0.03
LINC02050-201ENST00000473938 SPDYE6P0CI01 402 aa15.24■□□□□ 0.03
LINC02050-201ENST00000473938 SPDYE2Q495Y8 402 aa15.24■□□□□ 0.03
LINC02050-201ENST00000473938 PITPNM1O00562 1244 aa15.17■□□□□ 0.02
LINC02050-201ENST00000473938 ZNF692Q9BU19 519 aaPredicted RBP15.07■□□□□ 0
LINC02050-201ENST00000473938 SSUH2Q9Y2M2 353 aa15.07■□□□□ 0
LINC02050-201ENST00000473938 GABBR2O75899 941 aa14.99□□□□□ -0.01
LINC02050-201ENST00000473938 SPDYE1Q8NFV5 336 aaPredicted RBP14.92□□□□□ -0.02
LINC02050-201ENST00000473938 PABPN1Q86U42 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
LINC02050-201ENST00000473938 CLEC11AQ9Y240 323 aa14.87□□□□□ -0.03
LINC02050-201ENST00000473938 C19orf67A6NJJ6 358 aa14.85□□□□□ -0.03
LINC02050-201ENST00000473938 PRKAR2AP13861 404 aaKnown RBP14.74□□□□□ -0.05
LINC02050-201ENST00000473938 POTEIP0CG38 1075 aa14.71□□□□□ -0.05
LINC02050-201ENST00000473938 SPDYE4A6NLX3 237 aa14.7□□□□□ -0.06
LINC02050-201ENST00000473938 PRR29P0C7W0 189 aa14.65□□□□□ -0.06
LINC02050-201ENST00000473938 POTEMA6NI47 508 aa14.59□□□□□ -0.07
LINC02050-201ENST00000473938 CHADLQ6NUI6 762 aa14.58□□□□□ -0.08
LINC02050-201ENST00000473938 POTEGQ6S5H5 508 aa14.5□□□□□ -0.09
LINC02050-201ENST00000473938 STAG3Q9UJ98 1225 aa14.5□□□□□ -0.09
LINC02050-201ENST00000473938 PROM2Q8N271 834 aa14.41□□□□□ -0.1
LINC02050-201ENST00000473938 OTUD5Q96G74 571 aa14.4□□□□□ -0.1
LINC02050-201ENST00000473938 FARP1Q9Y4F1 1045 aaPredicted RBP14.39□□□□□ -0.11
LINC02050-201ENST00000473938 CREBZFQ9NS37 354 aa14.36□□□□□ -0.11
LINC02050-201ENST00000473938 PCDH10Q9P2E7 1040 aa14.31□□□□□ -0.12
LINC02050-201ENST00000473938 CD44P16070 742 aaKnown RBP14.25□□□□□ -0.13
LINC02050-201ENST00000473938 DCBLD2Q96PD2 775 aa14.23□□□□□ -0.13
LINC02050-201ENST00000473938 POTEB2H3BUK9 544 aa14.22□□□□□ -0.13
LINC02050-201ENST00000473938 FKBP8Q14318 412 aa14.17□□□□□ -0.14
LINC02050-201ENST00000473938 MNX1P50219 401 aaPredicted RBP14.15□□□□□ -0.14
LINC02050-201ENST00000473938 CLCN6P51797 869 aa14.11□□□□□ -0.15
LINC02050-201ENST00000473938 NPM1P06748 294 aaKnown RBP eCLIP14.08□□□□□ -0.16
LINC02050-201ENST00000473938 ZRANB1Q9UGI0 708 aa14.07□□□□□ -0.16
LINC02050-201ENST00000473938 ZNF579Q8NAF0 562 aaKnown RBP14.05□□□□□ -0.16
LINC02050-201ENST00000473938 LCE2DQ5TA82 110 aaPredicted RBP14□□□□□ -0.17
LINC02050-201ENST00000473938 PAK3O75914 559 aaPredicted RBP13.99□□□□□ -0.17
LINC02050-201ENST00000473938 MIER1Q8N108 512 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms