RNA–Protein interactions for RNA: ENST00000519990.1

AC025524.2-211, humanhuman

TSL 1 (best) BASIC

Gene AC025524.2, Length 1,173 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025524.2-211ENST00000519990 AEBP2Q6ZN18 517 aaPredicted RBP28.52■■■□□ 2.16
AC025524.2-211ENST00000519990 CHIC1Q5VXU3 224 aa28.06■■■□□ 2.08
AC025524.2-211ENST00000519990 PHF23Q9BUL5 403 aaPredicted RBP24.69■■□□□ 1.54
AC025524.2-211ENST00000519990 SENP3Q9H4L4 574 aaPredicted RBP24.2■■□□□ 1.46
AC025524.2-211ENST00000519990 PLPPR3Q6T4P5 718 aa22.86■■□□□ 1.25
AC025524.2-211ENST00000519990 POTEDQ86YR6 584 aa22.46■■□□□ 1.19
AC025524.2-211ENST00000519990 FOXD1Q16676 465 aa22.41■■□□□ 1.18
AC025524.2-211ENST00000519990 PPP6R1Q9UPN7 881 aa21.7■■□□□ 1.06
AC025524.2-211ENST00000519990 ADRA2BP18089 450 aa21.69■■□□□ 1.06
AC025524.2-211ENST00000519990 PIAS4Q8N2W9 510 aaPredicted RBP21.17■□□□□ 0.98
AC025524.2-211ENST00000519990 MSH5O43196 834 aa20.62■□□□□ 0.89
AC025524.2-211ENST00000519990 PPP4R3CPQ6ZMV5 832 aa20.15■□□□□ 0.82
AC025524.2-211ENST00000519990 KCNA4P22459 653 aa19.89■□□□□ 0.77
AC025524.2-211ENST00000519990 SCAF1Q9H7N4 1312 aaKnown RBP19.87■□□□□ 0.77
AC025524.2-211ENST00000519990 NCBP3Q53F19 620 aaKnown RBP19.7■□□□□ 0.74
AC025524.2-211ENST00000519990 MAPK8IP2Q13387 824 aaPredicted RBP19.61■□□□□ 0.73
AC025524.2-211ENST00000519990 CNKSR2Q8WXI2 1034 aa19.57■□□□□ 0.72
AC025524.2-211ENST00000519990 NPM3O75607 178 aaKnown RBP19.4■□□□□ 0.7
AC025524.2-211ENST00000519990 DMRT2Q9Y5R5 561 aa19.35■□□□□ 0.69
AC025524.2-211ENST00000519990 RNF216Q9NWF9 866 aaPredicted RBP19.14■□□□□ 0.65
AC025524.2-211ENST00000519990 HOXD11P31277 338 aaPredicted RBP19.03■□□□□ 0.64
AC025524.2-211ENST00000519990 SLC4A1APQ9BWU0 796 aaKnown RBP18.98■□□□□ 0.63
AC025524.2-211ENST00000519990 DNAJC5BQ9UF47 199 aa18.91■□□□□ 0.62
AC025524.2-211ENST00000519990 EHMT2Q96KQ7 1210 aa18.6■□□□□ 0.57
AC025524.2-211ENST00000519990 CACNB1Q02641 598 aaPredicted RBP18.46■□□□□ 0.55
AC025524.2-211ENST00000519990 DCAF8L1A6NGE4 600 aa18.42■□□□□ 0.54
AC025524.2-211ENST00000519990 CSRNP3Q8WYN3 585 aa18.36■□□□□ 0.53
AC025524.2-211ENST00000519990 ZBTB22O15209 634 aa18.32■□□□□ 0.52
AC025524.2-211ENST00000519990 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
AC025524.2-211ENST00000519990 FOXD4L1Q9NU39 408 aa18.27■□□□□ 0.52
AC025524.2-211ENST00000519990 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.09■□□□□ 0.49
AC025524.2-211ENST00000519990 MYCNP04198 464 aaPredicted RBP17.94■□□□□ 0.46
AC025524.2-211ENST00000519990 U3KPZ7 1027 aaPredicted RBP17.84■□□□□ 0.45
AC025524.2-211ENST00000519990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.7■□□□□ 0.42
AC025524.2-211ENST00000519990 HNRNPUL2Q1KMD3 747 aaKnown RBP17.7■□□□□ 0.42
AC025524.2-211ENST00000519990 RNF39Q9H2S5 420 aa17.69■□□□□ 0.42
AC025524.2-211ENST00000519990 ATXN8OSP0DMR3 200 aa17.66■□□□□ 0.42
AC025524.2-211ENST00000519990 SAMD1Q6SPF0 538 aaPredicted RBP17.64■□□□□ 0.41
AC025524.2-211ENST00000519990 C1QBPQ07021 282 aaKnown RBP17.49■□□□□ 0.39
AC025524.2-211ENST00000519990 APLP2Q06481 763 aa17.47■□□□□ 0.39
AC025524.2-211ENST00000519990 ATF5Q9Y2D1 282 aaPredicted RBP17.4■□□□□ 0.38
AC025524.2-211ENST00000519990 POTEHQ6S545 545 aa17.29■□□□□ 0.36
AC025524.2-211ENST00000519990 SPINK5Q9NQ38 1064 aaPredicted RBP17.27■□□□□ 0.36
AC025524.2-211ENST00000519990 ZNF219Q9P2Y4 722 aaPredicted RBP17.19■□□□□ 0.34
AC025524.2-211ENST00000519990 CAPN15O75808 1086 aa17.18■□□□□ 0.34
AC025524.2-211ENST00000519990 TRHP20396 242 aaPredicted RBP17.13■□□□□ 0.33
AC025524.2-211ENST00000519990 POLA2Q14181 598 aa16.92■□□□□ 0.3
AC025524.2-211ENST00000519990 DSG3P32926 999 aa16.88■□□□□ 0.29
AC025524.2-211ENST00000519990 ABCB7O75027 752 aa16.85■□□□□ 0.29
AC025524.2-211ENST00000519990 ZBTB12Q9Y330 459 aaPredicted RBP16.7■□□□□ 0.26
AC025524.2-211ENST00000519990 FBLN2P98095 1184 aa16.68■□□□□ 0.26
AC025524.2-211ENST00000519990 MKRN4PQ13434 485 aaPredicted RBP16.68■□□□□ 0.26
AC025524.2-211ENST00000519990 FKBP8Q14318 412 aa16.56■□□□□ 0.24
AC025524.2-211ENST00000519990 SPDYE4A6NLX3 237 aa16.39■□□□□ 0.21
AC025524.2-211ENST00000519990 OSCARQ8IYS5 282 aa16.33■□□□□ 0.2
AC025524.2-211ENST00000519990 SPDYE2BA6NHP3 402 aa16.26■□□□□ 0.19
AC025524.2-211ENST00000519990 SPDYE6P0CI01 402 aa16.26■□□□□ 0.19
AC025524.2-211ENST00000519990 SPDYE2Q495Y8 402 aa16.26■□□□□ 0.19
AC025524.2-211ENST00000519990 PROM2Q8N271 834 aa16.2■□□□□ 0.18
AC025524.2-211ENST00000519990 ZNF692Q9BU19 519 aaPredicted RBP16.18■□□□□ 0.18
AC025524.2-211ENST00000519990 SSUH2Q9Y2M2 353 aa16.16■□□□□ 0.18
AC025524.2-211ENST00000519990 RBM42Q9BTD8 480 aaKnown RBP16.1■□□□□ 0.17
AC025524.2-211ENST00000519990 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
AC025524.2-211ENST00000519990 FBXO3Q9UK99 471 aa15.96■□□□□ 0.15
AC025524.2-211ENST00000519990 AKT1S1Q96B36 256 aa15.94■□□□□ 0.14
AC025524.2-211ENST00000519990 STAG3Q9UJ98 1225 aa15.78■□□□□ 0.12
AC025524.2-211ENST00000519990 REM2Q8IYK8 340 aaPredicted RBP15.77■□□□□ 0.12
AC025524.2-211ENST00000519990 VASPP50552 380 aaPredicted RBP15.73■□□□□ 0.11
AC025524.2-211ENST00000519990 SPDYE1Q8NFV5 336 aaPredicted RBP15.72■□□□□ 0.11
AC025524.2-211ENST00000519990 PITPNM1O00562 1244 aa15.58■□□□□ 0.08
AC025524.2-211ENST00000519990 SP7Q8TDD2 431 aaPredicted RBP15.58■□□□□ 0.08
AC025524.2-211ENST00000519990 CLEC11AQ9Y240 323 aa15.58■□□□□ 0.08
AC025524.2-211ENST00000519990 IFNLR1Q8IU57 520 aaPredicted RBP15.52■□□□□ 0.08
AC025524.2-211ENST00000519990 PRR29P0C7W0 189 aa15.5■□□□□ 0.07
AC025524.2-211ENST00000519990 MIER1Q8N108 512 aa15.5■□□□□ 0.07
AC025524.2-211ENST00000519990 PLCD3Q8N3E9 789 aa15.5■□□□□ 0.07
AC025524.2-211ENST00000519990 AMER1Q5JTC6 1135 aaPredicted RBP15.45■□□□□ 0.06
AC025524.2-211ENST00000519990 CHRDL2Q6WN34 429 aa15.43■□□□□ 0.06
AC025524.2-211ENST00000519990 PLEKHG5O94827 1062 aa15.42■□□□□ 0.06
AC025524.2-211ENST00000519990 KLHL34Q8N239 644 aa15.38■□□□□ 0.05
AC025524.2-211ENST00000519990 RTN4Q9NQC3 1192 aaKnown RBP15.38■□□□□ 0.05
AC025524.2-211ENST00000519990 CREBZFQ9NS37 354 aa15.36■□□□□ 0.05
AC025524.2-211ENST00000519990 ZBTB47Q9UFB7 747 aaPredicted RBP15.36■□□□□ 0.05
AC025524.2-211ENST00000519990 SPOCK2Q92563 424 aa15.31■□□□□ 0.04
AC025524.2-211ENST00000519990 FXR2P51116 673 aaKnown RBP eCLIP15.27■□□□□ 0.04
AC025524.2-211ENST00000519990 MNX1P50219 401 aaPredicted RBP15.25■□□□□ 0.03
AC025524.2-211ENST00000519990 CHADLQ6NUI6 762 aa15.19■□□□□ 0.02
AC025524.2-211ENST00000519990 PRKAR2AP13861 404 aaKnown RBP15.18■□□□□ 0.02
AC025524.2-211ENST00000519990 PIP4P2Q8N4L2 257 aa15.18■□□□□ 0.02
AC025524.2-211ENST00000519990 NUBP1P53384 320 aa15.13■□□□□ 0.01
AC025524.2-211ENST00000519990 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
AC025524.2-211ENST00000519990 FARP1Q9Y4F1 1045 aaPredicted RBP15.11■□□□□ 0.01
AC025524.2-211ENST00000519990 PKD2Q13563 968 aa15.08■□□□□ 0
AC025524.2-211ENST00000519990 GSE1Q14687 1217 aa15□□□□□ -0.01
AC025524.2-211ENST00000519990 RASEFQ8IZ41 740 aa15□□□□□ -0.01
AC025524.2-211ENST00000519990 CIZ1Q9ULV3 898 aaPredicted RBP15□□□□□ -0.01
AC025524.2-211ENST00000519990 FAM212AQ96EL1 285 aa14.99□□□□□ -0.01
AC025524.2-211ENST00000519990 DCAF8Q5TAQ9 597 aa14.95□□□□□ -0.02
AC025524.2-211ENST00000519990 TRIM41Q8WV44 630 aa14.94□□□□□ -0.02
AC025524.2-211ENST00000519990 ECM2O94769 699 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms