RNA–Protein interactions for RNA: ENST00000555257.1

AL118556.1-201, humanhuman

TSL 2 BASIC

Gene AL118556.1, Length 502 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL118556.1-201ENST00000555257 AEBP2Q6ZN18 517 aaPredicted RBP29.36■■■□□ 2.29
AL118556.1-201ENST00000555257 CHIC1Q5VXU3 224 aa28.81■■■□□ 2.2
AL118556.1-201ENST00000555257 PHF23Q9BUL5 403 aaPredicted RBP25.38■■□□□ 1.65
AL118556.1-201ENST00000555257 SENP3Q9H4L4 574 aaPredicted RBP24.85■■□□□ 1.57
AL118556.1-201ENST00000555257 PLPPR3Q6T4P5 718 aa23.44■■□□□ 1.34
AL118556.1-201ENST00000555257 FOXD1Q16676 465 aa23.07■■□□□ 1.28
AL118556.1-201ENST00000555257 PPP6R1Q9UPN7 881 aa22.33■■□□□ 1.17
AL118556.1-201ENST00000555257 ADRA2BP18089 450 aa22.29■■□□□ 1.16
AL118556.1-201ENST00000555257 PIAS4Q8N2W9 510 aaPredicted RBP21.74■■□□□ 1.07
AL118556.1-201ENST00000555257 MSH5O43196 834 aa21.33■■□□□ 1.01
AL118556.1-201ENST00000555257 POTEDQ86YR6 584 aa21.09■□□□□ 0.97
AL118556.1-201ENST00000555257 PPP4R3CPQ6ZMV5 832 aa20.68■□□□□ 0.9
AL118556.1-201ENST00000555257 KCNA4P22459 653 aa20.39■□□□□ 0.85
AL118556.1-201ENST00000555257 SCAF1Q9H7N4 1312 aaKnown RBP20.36■□□□□ 0.85
AL118556.1-201ENST00000555257 MAPK8IP2Q13387 824 aaPredicted RBP20.19■□□□□ 0.82
AL118556.1-201ENST00000555257 NCBP3Q53F19 620 aaKnown RBP20.15■□□□□ 0.82
AL118556.1-201ENST00000555257 CNKSR2Q8WXI2 1034 aa20.06■□□□□ 0.8
AL118556.1-201ENST00000555257 NPM3O75607 178 aaKnown RBP19.9■□□□□ 0.78
AL118556.1-201ENST00000555257 DMRT2Q9Y5R5 561 aa19.88■□□□□ 0.77
AL118556.1-201ENST00000555257 RNF216Q9NWF9 866 aaPredicted RBP19.65■□□□□ 0.74
AL118556.1-201ENST00000555257 HOXD11P31277 338 aaPredicted RBP19.55■□□□□ 0.72
AL118556.1-201ENST00000555257 SLC4A1APQ9BWU0 796 aaKnown RBP19.41■□□□□ 0.7
AL118556.1-201ENST00000555257 DNAJC5BQ9UF47 199 aa19.38■□□□□ 0.69
AL118556.1-201ENST00000555257 EHMT2Q96KQ7 1210 aa19.01■□□□□ 0.63
AL118556.1-201ENST00000555257 DCAF8L1A6NGE4 600 aa18.91■□□□□ 0.62
AL118556.1-201ENST00000555257 ZBTB22O15209 634 aa18.8■□□□□ 0.6
AL118556.1-201ENST00000555257 CSRNP3Q8WYN3 585 aa18.8■□□□□ 0.6
AL118556.1-201ENST00000555257 SLC4A2P04920 1241 aa18.78■□□□□ 0.6
AL118556.1-201ENST00000555257 FOXD4L1Q9NU39 408 aa18.7■□□□□ 0.58
AL118556.1-201ENST00000555257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.55■□□□□ 0.56
AL118556.1-201ENST00000555257 CACNB1Q02641 598 aaPredicted RBP18.46■□□□□ 0.55
AL118556.1-201ENST00000555257 MYCNP04198 464 aaPredicted RBP18.36■□□□□ 0.53
AL118556.1-201ENST00000555257 U3KPZ7 1027 aaPredicted RBP18.34■□□□□ 0.53
AL118556.1-201ENST00000555257 RNF39Q9H2S5 420 aa18.2■□□□□ 0.5
AL118556.1-201ENST00000555257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.11■□□□□ 0.49
AL118556.1-201ENST00000555257 HNRNPUL2Q1KMD3 747 aaKnown RBP18.11■□□□□ 0.49
AL118556.1-201ENST00000555257 ATXN8OSP0DMR3 200 aa18.06■□□□□ 0.48
AL118556.1-201ENST00000555257 SAMD1Q6SPF0 538 aaPredicted RBP18.06■□□□□ 0.48
AL118556.1-201ENST00000555257 C1QBPQ07021 282 aaKnown RBP17.97■□□□□ 0.47
AL118556.1-201ENST00000555257 ATF5Q9Y2D1 282 aaPredicted RBP17.89■□□□□ 0.45
AL118556.1-201ENST00000555257 APLP2Q06481 763 aa17.86■□□□□ 0.45
AL118556.1-201ENST00000555257 SPINK5Q9NQ38 1064 aaPredicted RBP17.76■□□□□ 0.43
AL118556.1-201ENST00000555257 CAPN15O75808 1086 aa17.63■□□□□ 0.41
AL118556.1-201ENST00000555257 ZNF219Q9P2Y4 722 aaPredicted RBP17.61■□□□□ 0.41
AL118556.1-201ENST00000555257 TRHP20396 242 aaPredicted RBP17.58■□□□□ 0.4
AL118556.1-201ENST00000555257 POLA2Q14181 598 aa17.37■□□□□ 0.37
AL118556.1-201ENST00000555257 DSG3P32926 999 aa17.36■□□□□ 0.37
AL118556.1-201ENST00000555257 ABCB7O75027 752 aa17.32■□□□□ 0.36
AL118556.1-201ENST00000555257 MKRN4PQ13434 485 aaPredicted RBP17.14■□□□□ 0.33
AL118556.1-201ENST00000555257 ZBTB12Q9Y330 459 aaPredicted RBP17.08■□□□□ 0.32
AL118556.1-201ENST00000555257 FBLN2P98095 1184 aa17.07■□□□□ 0.32
AL118556.1-201ENST00000555257 FKBP8Q14318 412 aa16.93■□□□□ 0.3
AL118556.1-201ENST00000555257 SPDYE4A6NLX3 237 aa16.78■□□□□ 0.28
AL118556.1-201ENST00000555257 OSCARQ8IYS5 282 aa16.77■□□□□ 0.28
AL118556.1-201ENST00000555257 SPDYE2BA6NHP3 402 aa16.66■□□□□ 0.26
AL118556.1-201ENST00000555257 SPDYE6P0CI01 402 aa16.66■□□□□ 0.26
AL118556.1-201ENST00000555257 SPDYE2Q495Y8 402 aa16.66■□□□□ 0.26
AL118556.1-201ENST00000555257 PROM2Q8N271 834 aa16.6■□□□□ 0.25
AL118556.1-201ENST00000555257 ZNF692Q9BU19 519 aaPredicted RBP16.59■□□□□ 0.25
AL118556.1-201ENST00000555257 SSUH2Q9Y2M2 353 aa16.58■□□□□ 0.24
AL118556.1-201ENST00000555257 POTEHQ6S545 545 aa16.51■□□□□ 0.23
AL118556.1-201ENST00000555257 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
AL118556.1-201ENST00000555257 PABPN1Q86U42 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
AL118556.1-201ENST00000555257 AKT1S1Q96B36 256 aa16.35■□□□□ 0.21
AL118556.1-201ENST00000555257 FBXO3Q9UK99 471 aa16.29■□□□□ 0.2
AL118556.1-201ENST00000555257 REM2Q8IYK8 340 aaPredicted RBP16.2■□□□□ 0.18
AL118556.1-201ENST00000555257 STAG3Q9UJ98 1225 aa16.14■□□□□ 0.17
AL118556.1-201ENST00000555257 SPDYE1Q8NFV5 336 aaPredicted RBP16.11■□□□□ 0.17
AL118556.1-201ENST00000555257 VASPP50552 380 aaPredicted RBP16.09■□□□□ 0.17
AL118556.1-201ENST00000555257 PITPNM1O00562 1244 aa16.01■□□□□ 0.15
AL118556.1-201ENST00000555257 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
AL118556.1-201ENST00000555257 CHRDL2Q6WN34 429 aa15.95■□□□□ 0.14
AL118556.1-201ENST00000555257 PRR29P0C7W0 189 aa15.89■□□□□ 0.13
AL118556.1-201ENST00000555257 IFNLR1Q8IU57 520 aaPredicted RBP15.89■□□□□ 0.13
AL118556.1-201ENST00000555257 MIER1Q8N108 512 aa15.86■□□□□ 0.13
AL118556.1-201ENST00000555257 PLCD3Q8N3E9 789 aa15.85■□□□□ 0.13
AL118556.1-201ENST00000555257 CREBZFQ9NS37 354 aa15.78■□□□□ 0.12
AL118556.1-201ENST00000555257 PLEKHG5O94827 1062 aa15.73■□□□□ 0.11
AL118556.1-201ENST00000555257 AMER1Q5JTC6 1135 aaPredicted RBP15.71■□□□□ 0.11
AL118556.1-201ENST00000555257 KLHL34Q8N239 644 aa15.71■□□□□ 0.11
AL118556.1-201ENST00000555257 FXR2P51116 673 aaKnown RBP eCLIP15.7■□□□□ 0.1
AL118556.1-201ENST00000555257 RTN4Q9NQC3 1192 aaKnown RBP15.69■□□□□ 0.1
AL118556.1-201ENST00000555257 ZBTB47Q9UFB7 747 aaPredicted RBP15.68■□□□□ 0.1
AL118556.1-201ENST00000555257 MNX1P50219 401 aaPredicted RBP15.67■□□□□ 0.1
AL118556.1-201ENST00000555257 SPOCK2Q92563 424 aa15.65■□□□□ 0.1
AL118556.1-201ENST00000555257 CHADLQ6NUI6 762 aa15.62■□□□□ 0.09
AL118556.1-201ENST00000555257 PIP4P2Q8N4L2 257 aa15.61■□□□□ 0.09
AL118556.1-201ENST00000555257 PRKAR2AP13861 404 aaKnown RBP15.59■□□□□ 0.09
AL118556.1-201ENST00000555257 NUBP1P53384 320 aa15.51■□□□□ 0.07
AL118556.1-201ENST00000555257 FARP1Q9Y4F1 1045 aaPredicted RBP15.51■□□□□ 0.07
AL118556.1-201ENST00000555257 NPM1P06748 294 aaKnown RBP eCLIP15.47■□□□□ 0.07
AL118556.1-201ENST00000555257 PKD2Q13563 968 aa15.44■□□□□ 0.06
AL118556.1-201ENST00000555257 SP7Q8TDD2 431 aaPredicted RBP15.4■□□□□ 0.06
AL118556.1-201ENST00000555257 RASEFQ8IZ41 740 aa15.39■□□□□ 0.05
AL118556.1-201ENST00000555257 HAX1O00165 279 aa15.34■□□□□ 0.05
AL118556.1-201ENST00000555257 CIZ1Q9ULV3 898 aaPredicted RBP15.34■□□□□ 0.05
AL118556.1-201ENST00000555257 GSE1Q14687 1217 aa15.33■□□□□ 0.04
AL118556.1-201ENST00000555257 FAM212AQ96EL1 285 aa15.32■□□□□ 0.04
AL118556.1-201ENST00000555257 DCAF8Q5TAQ9 597 aa15.3■□□□□ 0.04
AL118556.1-201ENST00000555257 ECM2O94769 699 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms