Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 ELL2P4-201ENST00000446870 1376 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 ABCA11P-202ENST00000504019 2110 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AC109780.1-201ENST00000451768 1344 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 ESD-201ENST00000378697 1079 ntTSL 5 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 SNORA22B-201ENST00000383876 138 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 Y_RNA.409-201ENST00000383990 98 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 SNORA51.9-201ENST00000384295 124 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AC066692.1-201ENST00000421721 457 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AC009965.2-201ENST00000425328 970 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 FAR2P1-206ENST00000449736 709 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 RN7SL643P-201ENST00000471845 291 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 RPL12P31-201ENST00000478433 450 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 VN1R104P-201ENST00000505115 1009 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 Y_RNA.693-201ENST00000516641 110 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 RN7SKP35-201ENST00000517210 151 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 IGKV3D-25-201ENST00000519599 235 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 MYL12BP1-201ENST00000569826 507 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 MRPS21P9-201ENST00000571150 257 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AC018638.8-201ENST00000588755 281 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AL627309.6-201ENST00000606857 840 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AC024255.1-201ENST00000614376 102 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 AC129915.3-201ENST00000634128 948 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 TPTEP1-208ENST00000636884 213 ntBASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
PDZRN3Q9UPQ7 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 CR383658.2-201ENST00000547576 1525 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 SNORA40.3-201ENST00000390964 122 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AP003170.5-201ENST00000397185 335 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 RN7SKP140-201ENST00000411196 284 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AC007568.1-201ENST00000422912 471 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 ATP6V1E1P1-201ENST00000439215 681 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AC073109.1-201ENST00000445066 978 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AC239367.2-201ENST00000447309 705 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 RPL7P48-201ENST00000461513 746 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 RN7SL174P-201ENST00000475578 289 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AC079140.5-201ENST00000507882 310 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 ATP1B1P1-201ENST00000509767 915 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AC079395.1-201ENST00000510981 262 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 RNU6-388P-201ENST00000517012 105 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 RNU6-389P-201ENST00000517048 105 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 LECT2-205ENST00000522943 574 ntTSL 3 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AC006270.2-201ENST00000578523 652 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AC009597.2-201ENST00000604659 592 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AC018462.2-201ENST00000605375 395 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AC037198.3-201ENST00000616754 526 ntBASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
PDZRN3Q9UPQ7 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms