RNA–Protein interactions for RNA: ENST00000517012.1

RNU6-388P-201, Transcript of RNA, U6 small nuclear 388, pseudogene, humanhuman

BASIC

Gene RNU6-388P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-388P-201ENST00000517012 AEBP2Q6ZN18 517 aaPredicted RBP21.43■■□□□ 1.02
RNU6-388P-201ENST00000517012 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
RNU6-388P-201ENST00000517012 SENP3Q9H4L4 574 aaPredicted RBP18.45■□□□□ 0.54
RNU6-388P-201ENST00000517012 PHF23Q9BUL5 403 aaPredicted RBP18.11■□□□□ 0.49
RNU6-388P-201ENST00000517012 FOXD1Q16676 465 aa17.18■□□□□ 0.34
RNU6-388P-201ENST00000517012 POTEDQ86YR6 584 aa16.57■□□□□ 0.24
RNU6-388P-201ENST00000517012 MSH5O43196 834 aa16.33■□□□□ 0.2
RNU6-388P-201ENST00000517012 PIAS4Q8N2W9 510 aaPredicted RBP15.97■□□□□ 0.15
RNU6-388P-201ENST00000517012 PLPPR3Q6T4P5 718 aa15.84■□□□□ 0.13
RNU6-388P-201ENST00000517012 PPP6R1Q9UPN7 881 aa15.71■□□□□ 0.11
RNU6-388P-201ENST00000517012 ADRA2BP18089 450 aa15.64■□□□□ 0.09
RNU6-388P-201ENST00000517012 DMRT2Q9Y5R5 561 aa14.54□□□□□ -0.08
RNU6-388P-201ENST00000517012 MAPK8IP2Q13387 824 aaPredicted RBP14.47□□□□□ -0.09
RNU6-388P-201ENST00000517012 SCAF1Q9H7N4 1312 aaKnown RBP14.43□□□□□ -0.1
RNU6-388P-201ENST00000517012 CACNB1Q02641 598 aaPredicted RBP14.23□□□□□ -0.13
RNU6-388P-201ENST00000517012 DCAF8L1A6NGE4 600 aa13.94□□□□□ -0.18
RNU6-388P-201ENST00000517012 HOXD11P31277 338 aaPredicted RBP13.85□□□□□ -0.19
RNU6-388P-201ENST00000517012 RNF39Q9H2S5 420 aa13.85□□□□□ -0.19
RNU6-388P-201ENST00000517012 PPP4R3CPQ6ZMV5 832 aa13.78□□□□□ -0.2
RNU6-388P-201ENST00000517012 C1QBPQ07021 282 aaKnown RBP13.67□□□□□ -0.22
RNU6-388P-201ENST00000517012 CNKSR2Q8WXI2 1034 aa13.66□□□□□ -0.22
RNU6-388P-201ENST00000517012 RNF216Q9NWF9 866 aaPredicted RBP13.65□□□□□ -0.22
RNU6-388P-201ENST00000517012 DNAJC5BQ9UF47 199 aa13.54□□□□□ -0.24
RNU6-388P-201ENST00000517012 NCBP3Q53F19 620 aaKnown RBP13.2□□□□□ -0.3
RNU6-388P-201ENST00000517012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.19□□□□□ -0.3
RNU6-388P-201ENST00000517012 POTEHQ6S545 545 aa12.93□□□□□ -0.34
RNU6-388P-201ENST00000517012 NPM3O75607 178 aaKnown RBP12.92□□□□□ -0.34
RNU6-388P-201ENST00000517012 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
RNU6-388P-201ENST00000517012 DSG3P32926 999 aa12.82□□□□□ -0.36
RNU6-388P-201ENST00000517012 CAPN15O75808 1086 aa12.79□□□□□ -0.36
RNU6-388P-201ENST00000517012 SPINK5Q9NQ38 1064 aaPredicted RBP12.75□□□□□ -0.37
RNU6-388P-201ENST00000517012 APLP2Q06481 763 aa12.56□□□□□ -0.4
RNU6-388P-201ENST00000517012 ZNF219Q9P2Y4 722 aaPredicted RBP12.51□□□□□ -0.41
RNU6-388P-201ENST00000517012 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
RNU6-388P-201ENST00000517012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.44□□□□□ -0.42
RNU6-388P-201ENST00000517012 HNRNPUL2Q1KMD3 747 aaKnown RBP12.44□□□□□ -0.42
RNU6-388P-201ENST00000517012 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
RNU6-388P-201ENST00000517012 ABCB7O75027 752 aa12.41□□□□□ -0.42
RNU6-388P-201ENST00000517012 SAMD1Q6SPF0 538 aaPredicted RBP12.32□□□□□ -0.44
RNU6-388P-201ENST00000517012 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
RNU6-388P-201ENST00000517012 KCNA4P22459 653 aa12.27□□□□□ -0.45
RNU6-388P-201ENST00000517012 CHRDL2Q6WN34 429 aa12.16□□□□□ -0.46
RNU6-388P-201ENST00000517012 POLA2Q14181 598 aa12.05□□□□□ -0.48
RNU6-388P-201ENST00000517012 MYCNP04198 464 aaPredicted RBP12.01□□□□□ -0.49
RNU6-388P-201ENST00000517012 SP7Q8TDD2 431 aaPredicted RBP11.93□□□□□ -0.5
RNU6-388P-201ENST00000517012 AKT1S1Q96B36 256 aa11.92□□□□□ -0.5
RNU6-388P-201ENST00000517012 ZBTB12Q9Y330 459 aaPredicted RBP11.86□□□□□ -0.51
RNU6-388P-201ENST00000517012 REM2Q8IYK8 340 aaPredicted RBP11.76□□□□□ -0.53
RNU6-388P-201ENST00000517012 PIP4P2Q8N4L2 257 aa11.75□□□□□ -0.53
RNU6-388P-201ENST00000517012 HAX1O00165 279 aa11.67□□□□□ -0.54
RNU6-388P-201ENST00000517012 ATF5Q9Y2D1 282 aaPredicted RBP11.67□□□□□ -0.54
RNU6-388P-201ENST00000517012 OSCARQ8IYS5 282 aa11.66□□□□□ -0.54
RNU6-388P-201ENST00000517012 FOXD4L1Q9NU39 408 aa11.65□□□□□ -0.54
RNU6-388P-201ENST00000517012 FXR2P51116 673 aaKnown RBP eCLIP11.64□□□□□ -0.55
RNU6-388P-201ENST00000517012 PITPNM1O00562 1244 aa11.62□□□□□ -0.55
RNU6-388P-201ENST00000517012 SLC4A1APQ9BWU0 796 aaKnown RBP11.54□□□□□ -0.56
RNU6-388P-201ENST00000517012 SPDYE2BA6NHP3 402 aa11.43□□□□□ -0.58
RNU6-388P-201ENST00000517012 SPDYE6P0CI01 402 aa11.43□□□□□ -0.58
RNU6-388P-201ENST00000517012 SPDYE2Q495Y8 402 aa11.43□□□□□ -0.58
RNU6-388P-201ENST00000517012 EVX2Q03828 476 aa11.42□□□□□ -0.58
RNU6-388P-201ENST00000517012 ATXN8OSP0DMR3 200 aa11.38□□□□□ -0.59
RNU6-388P-201ENST00000517012 FBLN2P98095 1184 aa11.36□□□□□ -0.59
RNU6-388P-201ENST00000517012 PRKAR2AP13861 404 aaKnown RBP11.33□□□□□ -0.6
RNU6-388P-201ENST00000517012 SPDYE1Q8NFV5 336 aaPredicted RBP11.33□□□□□ -0.6
RNU6-388P-201ENST00000517012 CLEC11AQ9Y240 323 aa11.28□□□□□ -0.6
RNU6-388P-201ENST00000517012 C19orf67A6NJJ6 358 aa11.27□□□□□ -0.61
RNU6-388P-201ENST00000517012 ZBTB22O15209 634 aa11.24□□□□□ -0.61
RNU6-388P-201ENST00000517012 GABBR2O75899 941 aa11.2□□□□□ -0.62
RNU6-388P-201ENST00000517012 ZNF692Q9BU19 519 aaPredicted RBP11.2□□□□□ -0.62
RNU6-388P-201ENST00000517012 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
RNU6-388P-201ENST00000517012 LHX8Q68G74 356 aa11.18□□□□□ -0.62
RNU6-388P-201ENST00000517012 MKRN4PQ13434 485 aaPredicted RBP11.13□□□□□ -0.63
RNU6-388P-201ENST00000517012 PRR29P0C7W0 189 aa11.07□□□□□ -0.64
RNU6-388P-201ENST00000517012 CHADLQ6NUI6 762 aa11.07□□□□□ -0.64
RNU6-388P-201ENST00000517012 CLCN6P51797 869 aa11.02□□□□□ -0.65
RNU6-388P-201ENST00000517012 PABPN1Q86U42 306 aaKnown RBP eCLIP10.99□□□□□ -0.65
RNU6-388P-201ENST00000517012 CD44P16070 742 aaKnown RBP10.95□□□□□ -0.66
RNU6-388P-201ENST00000517012 POTEIP0CG38 1075 aa10.92□□□□□ -0.66
RNU6-388P-201ENST00000517012 FARP1Q9Y4F1 1045 aaPredicted RBP10.92□□□□□ -0.66
RNU6-388P-201ENST00000517012 DCBLD2Q96PD2 775 aa10.85□□□□□ -0.67
RNU6-388P-201ENST00000517012 ZNF579Q8NAF0 562 aaKnown RBP10.79□□□□□ -0.68
RNU6-388P-201ENST00000517012 PLSCR2Q9NRY7 297 aa10.78□□□□□ -0.68
RNU6-388P-201ENST00000517012 ZRANB1Q9UGI0 708 aa10.73□□□□□ -0.69
RNU6-388P-201ENST00000517012 STAG3Q9UJ98 1225 aa10.69□□□□□ -0.7
RNU6-388P-201ENST00000517012 CREBZFQ9NS37 354 aa10.65□□□□□ -0.7
RNU6-388P-201ENST00000517012 GALR2O43603 387 aaPredicted RBP10.63□□□□□ -0.71
RNU6-388P-201ENST00000517012 OTUD5Q96G74 571 aa10.63□□□□□ -0.71
RNU6-388P-201ENST00000517012 PAK3O75914 559 aaPredicted RBP10.61□□□□□ -0.71
RNU6-388P-201ENST00000517012 POTEMA6NI47 508 aa10.54□□□□□ -0.72
RNU6-388P-201ENST00000517012 POTEB2H3BUK9 544 aa10.54□□□□□ -0.72
RNU6-388P-201ENST00000517012 NPM1P06748 294 aaKnown RBP eCLIP10.52□□□□□ -0.73
RNU6-388P-201ENST00000517012 PHF12Q96QT6 1004 aa10.5□□□□□ -0.73
RNU6-388P-201ENST00000517012 POTEGQ6S5H5 508 aa10.49□□□□□ -0.73
RNU6-388P-201ENST00000517012 PCDH10Q9P2E7 1040 aa10.49□□□□□ -0.73
RNU6-388P-201ENST00000517012 PELP1Q8IZL8 1130 aaKnown RBP10.45□□□□□ -0.74
RNU6-388P-201ENST00000517012 SPDYE4A6NLX3 237 aa10.44□□□□□ -0.74
RNU6-388P-201ENST00000517012 C7P10643 843 aa10.43□□□□□ -0.74
RNU6-388P-201ENST00000517012 ASTLQ6HA08 431 aaPredicted RBP10.43□□□□□ -0.74
RNU6-388P-201ENST00000517012 SLC39A7Q92504 469 aa10.43□□□□□ -0.74
RNU6-388P-201ENST00000517012 MAMSTRQ6ZN01 415 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms