Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
BIVM-ERCC5R4GMW8 AC073314.1-201ENST00000568729 2216 ntBASIC32.5■■■□□ 2.79
BIVM-ERCC5R4GMW8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC32.5■■■□□ 2.79
BIVM-ERCC5R4GMW8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
BIVM-ERCC5R4GMW8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
BIVM-ERCC5R4GMW8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
BIVM-ERCC5R4GMW8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC32.49■■■□□ 2.79
BIVM-ERCC5R4GMW8 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC32.49■■■□□ 2.79
BIVM-ERCC5R4GMW8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC32.49■■■□□ 2.79
BIVM-ERCC5R4GMW8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC32.49■■■□□ 2.79
BIVM-ERCC5R4GMW8 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
BIVM-ERCC5R4GMW8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
BIVM-ERCC5R4GMW8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC32.49■■■□□ 2.79
BIVM-ERCC5R4GMW8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC32.49■■■□□ 2.79
BIVM-ERCC5R4GMW8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC32.49■■■□□ 2.79
BIVM-ERCC5R4GMW8 AL691432.2-201ENST00000607222 2038 ntBASIC32.49■■■□□ 2.79
BIVM-ERCC5R4GMW8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
BIVM-ERCC5R4GMW8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC32.49■■■□□ 2.79
BIVM-ERCC5R4GMW8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
BIVM-ERCC5R4GMW8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC32.48■■■□□ 2.79
BIVM-ERCC5R4GMW8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
BIVM-ERCC5R4GMW8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
BIVM-ERCC5R4GMW8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC32.48■■■□□ 2.79
BIVM-ERCC5R4GMW8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC32.48■■■□□ 2.79
BIVM-ERCC5R4GMW8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
BIVM-ERCC5R4GMW8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC32.48■■■□□ 2.79
BIVM-ERCC5R4GMW8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
BIVM-ERCC5R4GMW8 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC32.48■■■□□ 2.79
BIVM-ERCC5R4GMW8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
BIVM-ERCC5R4GMW8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC32.48■■■□□ 2.79
BIVM-ERCC5R4GMW8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC32.48■■■□□ 2.79
BIVM-ERCC5R4GMW8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC32.48■■■□□ 2.79
BIVM-ERCC5R4GMW8 VENTXP5-201ENST00000523979 775 ntBASIC32.48■■■□□ 2.79
BIVM-ERCC5R4GMW8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC32.48■■■□□ 2.79
BIVM-ERCC5R4GMW8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
BIVM-ERCC5R4GMW8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
BIVM-ERCC5R4GMW8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC32.47■■■□□ 2.79
BIVM-ERCC5R4GMW8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC32.47■■■□□ 2.79
BIVM-ERCC5R4GMW8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC32.47■■■□□ 2.79
BIVM-ERCC5R4GMW8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC32.47■■■□□ 2.79
BIVM-ERCC5R4GMW8 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC32.47■■■□□ 2.79
BIVM-ERCC5R4GMW8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC32.47■■■□□ 2.79
BIVM-ERCC5R4GMW8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
BIVM-ERCC5R4GMW8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
BIVM-ERCC5R4GMW8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
BIVM-ERCC5R4GMW8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC32.46■■■□□ 2.79
BIVM-ERCC5R4GMW8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC32.46■■■□□ 2.79
BIVM-ERCC5R4GMW8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC32.46■■■□□ 2.79
BIVM-ERCC5R4GMW8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
BIVM-ERCC5R4GMW8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC32.46■■■□□ 2.79
BIVM-ERCC5R4GMW8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC32.46■■■□□ 2.79
BIVM-ERCC5R4GMW8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
BIVM-ERCC5R4GMW8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC32.46■■■□□ 2.79
BIVM-ERCC5R4GMW8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC32.45■■■□□ 2.79
BIVM-ERCC5R4GMW8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC32.45■■■□□ 2.79
BIVM-ERCC5R4GMW8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
BIVM-ERCC5R4GMW8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC32.45■■■□□ 2.79
BIVM-ERCC5R4GMW8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC32.45■■■□□ 2.79
BIVM-ERCC5R4GMW8 AL031432.5-201ENST00000641059 760 ntBASIC32.45■■■□□ 2.79
BIVM-ERCC5R4GMW8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
BIVM-ERCC5R4GMW8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC32.45■■■□□ 2.78
BIVM-ERCC5R4GMW8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
BIVM-ERCC5R4GMW8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
BIVM-ERCC5R4GMW8 AL136038.3-201ENST00000561909 1096 ntBASIC32.44■■■□□ 2.78
BIVM-ERCC5R4GMW8 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC32.44■■■□□ 2.78
BIVM-ERCC5R4GMW8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC32.44■■■□□ 2.78
BIVM-ERCC5R4GMW8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
BIVM-ERCC5R4GMW8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
BIVM-ERCC5R4GMW8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC32.44■■■□□ 2.78
BIVM-ERCC5R4GMW8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC32.44■■■□□ 2.78
BIVM-ERCC5R4GMW8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
BIVM-ERCC5R4GMW8 AL512408.1-201ENST00000569378 2000 ntBASIC32.43■■■□□ 2.78
BIVM-ERCC5R4GMW8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC32.43■■■□□ 2.78
BIVM-ERCC5R4GMW8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC32.43■■■□□ 2.78
BIVM-ERCC5R4GMW8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
BIVM-ERCC5R4GMW8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
BIVM-ERCC5R4GMW8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
BIVM-ERCC5R4GMW8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC32.43■■■□□ 2.78
BIVM-ERCC5R4GMW8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC32.43■■■□□ 2.78
BIVM-ERCC5R4GMW8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
BIVM-ERCC5R4GMW8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC32.43■■■□□ 2.78
BIVM-ERCC5R4GMW8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC32.43■■■□□ 2.78
BIVM-ERCC5R4GMW8 KRT126P-201ENST00000549467 1181 ntBASIC32.43■■■□□ 2.78
BIVM-ERCC5R4GMW8 NPAP1P7-201ENST00000613027 823 ntBASIC32.43■■■□□ 2.78
BIVM-ERCC5R4GMW8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
BIVM-ERCC5R4GMW8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC32.42■■■□□ 2.78
BIVM-ERCC5R4GMW8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC32.42■■■□□ 2.78
BIVM-ERCC5R4GMW8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC32.42■■■□□ 2.78
BIVM-ERCC5R4GMW8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC32.42■■■□□ 2.78
BIVM-ERCC5R4GMW8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
BIVM-ERCC5R4GMW8 AL162377.1-201ENST00000618844 1793 ntBASIC32.42■■■□□ 2.78
BIVM-ERCC5R4GMW8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
BIVM-ERCC5R4GMW8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
BIVM-ERCC5R4GMW8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
BIVM-ERCC5R4GMW8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC32.41■■■□□ 2.78
BIVM-ERCC5R4GMW8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
BIVM-ERCC5R4GMW8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
BIVM-ERCC5R4GMW8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
BIVM-ERCC5R4GMW8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
BIVM-ERCC5R4GMW8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC32.41■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms