Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 AL031598.1-201ENST00000561511 1773 ntBASIC20.58■□□□□ 0.89
CAPN6Q9Y6Q1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.58■□□□□ 0.88
CAPN6Q9Y6Q1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CAPN6Q9Y6Q1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CAPN6Q9Y6Q1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CAPN6Q9Y6Q1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CAPN6Q9Y6Q1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CAPN6Q9Y6Q1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CAPN6Q9Y6Q1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CAPN6Q9Y6Q1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CAPN6Q9Y6Q1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CAPN6Q9Y6Q1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
CAPN6Q9Y6Q1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CAPN6Q9Y6Q1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 SDHAP1-207ENST00000440850 2000 ntBASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.57■□□□□ 0.88
CAPN6Q9Y6Q1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 WIZP1-201ENST00000531444 2299 ntBASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.56■□□□□ 0.88
CAPN6Q9Y6Q1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 LETM1P2-201ENST00000597330 2178 ntBASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 AL512625.2-201ENST00000417533 625 ntBASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.55■□□□□ 0.88
CAPN6Q9Y6Q1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN6Q9Y6Q1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CAPN6Q9Y6Q1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.54■□□□□ 0.88
CAPN6Q9Y6Q1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.54■□□□□ 0.88
CAPN6Q9Y6Q1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN6Q9Y6Q1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.54■□□□□ 0.88
CAPN6Q9Y6Q1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.54■□□□□ 0.88
CAPN6Q9Y6Q1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
CAPN6Q9Y6Q1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.54■□□□□ 0.88
CAPN6Q9Y6Q1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN6Q9Y6Q1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.54■□□□□ 0.88
CAPN6Q9Y6Q1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.54■□□□□ 0.88
CAPN6Q9Y6Q1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms