Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 TMEM179-206ENST00000616017 1645 ntBASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCH2Q9Y6C5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCH2Q9Y6C5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
PTCH2Q9Y6C5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.97■■□□□ 1.11
PTCH2Q9Y6C5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCH2Q9Y6C5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCH2Q9Y6C5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PTCH2Q9Y6C5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PTCH2Q9Y6C5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCH2Q9Y6C5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCH2Q9Y6C5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
PTCH2Q9Y6C5 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.97■■□□□ 1.11
PTCH2Q9Y6C5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.97■■□□□ 1.11
PTCH2Q9Y6C5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCH2Q9Y6C5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PTCH2Q9Y6C5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.97■■□□□ 1.11
PTCH2Q9Y6C5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 AC104692.2-201ENST00000603054 253 ntBASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 AC016734.2-201ENST00000624325 1377 ntBASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
PTCH2Q9Y6C5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTCH2Q9Y6C5 AL049796.1-201ENST00000565336 1766 ntBASIC21.95■■□□□ 1.1
PTCH2Q9Y6C5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTCH2Q9Y6C5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.95■■□□□ 1.1
PTCH2Q9Y6C5 AP002383.4-201ENST00000442518 975 ntBASIC21.95■■□□□ 1.1
PTCH2Q9Y6C5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTCH2Q9Y6C5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.95■■□□□ 1.1
PTCH2Q9Y6C5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTCH2Q9Y6C5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PTCH2Q9Y6C5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.95■■□□□ 1.1
PTCH2Q9Y6C5 KRT8P8-201ENST00000434750 1448 ntBASIC21.95■■□□□ 1.1
PTCH2Q9Y6C5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTCH2Q9Y6C5 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PTCH2Q9Y6C5 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.95■■□□□ 1.1
PTCH2Q9Y6C5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 AC092597.1-201ENST00000487352 616 ntBASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 AL121672.3-201ENST00000608644 468 ntBASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PTCH2Q9Y6C5 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTCH2Q9Y6C5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTCH2Q9Y6C5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTCH2Q9Y6C5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTCH2Q9Y6C5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTCH2Q9Y6C5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
PTCH2Q9Y6C5 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PTCH2Q9Y6C5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms