Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA6Q9Y5G7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 MMP23A-201ENST00000234610 1017 ntBASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 FAM197Y1-201ENST00000421178 764 ntBASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 AL031963.3-201ENST00000606441 850 ntBASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 KRT8P20-201ENST00000423953 1409 ntBASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHGA6Q9Y5G7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PCDHGA6Q9Y5G7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PCDHGA6Q9Y5G7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.71■□□□□ 0.58
PCDHGA6Q9Y5G7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHGA6Q9Y5G7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 NUDT16P1-203ENST00000513809 620 ntBASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 AL158211.5-201ENST00000623583 2518 ntBASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHGA6Q9Y5G7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHGA6Q9Y5G7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA6Q9Y5G7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGA6Q9Y5G7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA6Q9Y5G7 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA6Q9Y5G7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA6Q9Y5G7 RCN1P1-201ENST00000400413 996 ntBASIC18.68■□□□□ 0.58
PCDHGA6Q9Y5G7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGA6Q9Y5G7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA6Q9Y5G7 AP002982.1-201ENST00000492365 877 ntBASIC18.68■□□□□ 0.58
PCDHGA6Q9Y5G7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.68■□□□□ 0.58
PCDHGA6Q9Y5G7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA6Q9Y5G7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGA6Q9Y5G7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA6Q9Y5G7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA6Q9Y5G7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA6Q9Y5G7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
PCDHGA6Q9Y5G7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms