Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 LINC01465-201ENST00000408887 1940 ntBASIC19.63■□□□□ 0.73
PCDHGC4Q9Y5F7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 NIFKP9-201ENST00000419265 221 ntBASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 AC012618.2-201ENST00000428058 849 ntBASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 AL353708.3-201ENST00000610272 989 ntBASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 HLA-A-209ENST00000638375 975 ntBASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGC4Q9Y5F7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGC4Q9Y5F7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGC4Q9Y5F7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGC4Q9Y5F7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGC4Q9Y5F7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGC4Q9Y5F7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGC4Q9Y5F7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGC4Q9Y5F7 MIR718-201ENST00000390190 70 ntBASIC19.61■□□□□ 0.73
PCDHGC4Q9Y5F7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDHGC4Q9Y5F7 AL049637.2-201ENST00000641778 930 ntBASIC19.61■□□□□ 0.73
PCDHGC4Q9Y5F7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGC4Q9Y5F7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGC4Q9Y5F7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGC4Q9Y5F7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGC4Q9Y5F7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGC4Q9Y5F7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 AC073195.1-201ENST00000607241 877 ntBASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 AC113410.3-201ENST00000623366 203 ntBASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGC4Q9Y5F7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 FAM197Y1-201ENST00000421178 764 ntBASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 CR392000.1-201ENST00000624770 1228 ntBASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGC4Q9Y5F7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms