Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC30.07■■■□□ 2.4
CDK11AQ9UQ88 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CDK11AQ9UQ88 DAP-202ENST00000432074 1048 ntTSL 2 BASIC30.07■■■□□ 2.4
CDK11AQ9UQ88 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
CDK11AQ9UQ88 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC30.07■■■□□ 2.4
CDK11AQ9UQ88 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC30.07■■■□□ 2.4
CDK11AQ9UQ88 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
CDK11AQ9UQ88 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC30.07■■■□□ 2.4
CDK11AQ9UQ88 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CDK11AQ9UQ88 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CDK11AQ9UQ88 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CDK11AQ9UQ88 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC30.07■■■□□ 2.4
CDK11AQ9UQ88 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 BET1L-202ENST00000332865 533 ntTSL 5 BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 ETFA-216ENST00000560726 942 ntTSL 3 BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
CDK11AQ9UQ88 KRT8P45-201ENST00000414328 1447 ntBASIC30.05■■■□□ 2.4
CDK11AQ9UQ88 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDK11AQ9UQ88 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDK11AQ9UQ88 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDK11AQ9UQ88 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDK11AQ9UQ88 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDK11AQ9UQ88 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDK11AQ9UQ88 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC30.05■■■□□ 2.4
CDK11AQ9UQ88 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC30.05■■■□□ 2.4
CDK11AQ9UQ88 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC30.05■■■□□ 2.4
CDK11AQ9UQ88 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC30.05■■■□□ 2.4
CDK11AQ9UQ88 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC30.05■■■□□ 2.4
CDK11AQ9UQ88 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDK11AQ9UQ88 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDK11AQ9UQ88 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDK11AQ9UQ88 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CDK11AQ9UQ88 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
CDK11AQ9UQ88 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
CDK11AQ9UQ88 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC30.04■■■□□ 2.4
CDK11AQ9UQ88 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CDK11AQ9UQ88 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
CDK11AQ9UQ88 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
CDK11AQ9UQ88 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CDK11AQ9UQ88 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC30.04■■■□□ 2.4
CDK11AQ9UQ88 KRT126P-201ENST00000549467 1181 ntBASIC30.04■■■□□ 2.4
CDK11AQ9UQ88 AC116407.4-201ENST00000623319 1061 ntBASIC30.04■■■□□ 2.4
CDK11AQ9UQ88 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CDK11AQ9UQ88 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CDK11AQ9UQ88 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CDK11AQ9UQ88 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC30.04■■■□□ 2.4
CDK11AQ9UQ88 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC30.03■■■□□ 2.4
CDK11AQ9UQ88 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CDK11AQ9UQ88 AC020907.5-201ENST00000624372 1936 ntBASIC30.03■■■□□ 2.4
CDK11AQ9UQ88 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
CDK11AQ9UQ88 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CDK11AQ9UQ88 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC30.03■■■□□ 2.4
CDK11AQ9UQ88 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC30.03■■■□□ 2.4
CDK11AQ9UQ88 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC30.03■■■□□ 2.4
CDK11AQ9UQ88 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
CDK11AQ9UQ88 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC30.03■■■□□ 2.4
CDK11AQ9UQ88 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
CDK11AQ9UQ88 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CDK11AQ9UQ88 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
CDK11AQ9UQ88 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC30.03■■■□□ 2.4
CDK11AQ9UQ88 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 AC005332.1-201ENST00000577698 1310 ntBASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 NEK4P2-201ENST00000580004 1012 ntBASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 AC009237.14-201ENST00000609975 1594 ntBASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC30.02■■■□□ 2.4
CDK11AQ9UQ88 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC30.01■■■□□ 2.4
CDK11AQ9UQ88 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CDK11AQ9UQ88 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
CDK11AQ9UQ88 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CDK11AQ9UQ88 KRT18P48-201ENST00000434763 852 ntBASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms