Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AL049812.1-201ENST00000432563 2267 ntBASIC17.3■□□□□ 0.36
COPS3Q9UNS2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 AC004911.1-201ENST00000416316 871 ntBASIC17.29■□□□□ 0.36
COPS3Q9UNS2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 RARRES2P6-201ENST00000567333 442 ntBASIC17.29■□□□□ 0.36
COPS3Q9UNS2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 AC005181.1-201ENST00000604782 1256 ntBASIC17.29■□□□□ 0.36
COPS3Q9UNS2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COPS3Q9UNS2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
COPS3Q9UNS2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPS3Q9UNS2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.28■□□□□ 0.36
COPS3Q9UNS2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPS3Q9UNS2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPS3Q9UNS2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
COPS3Q9UNS2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.28■□□□□ 0.36
COPS3Q9UNS2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.28■□□□□ 0.36
COPS3Q9UNS2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.28■□□□□ 0.36
COPS3Q9UNS2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPS3Q9UNS2 TEX21P-204ENST00000641479 1693 ntBASIC17.28■□□□□ 0.36
COPS3Q9UNS2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPS3Q9UNS2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COPS3Q9UNS2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COPS3Q9UNS2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.28■□□□□ 0.36
COPS3Q9UNS2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 CROCCP3-202ENST00000420820 1947 ntBASIC17.27■□□□□ 0.36
COPS3Q9UNS2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 LSM12P1-201ENST00000411836 588 ntBASIC17.27■□□□□ 0.36
COPS3Q9UNS2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 AL162430.1-201ENST00000480705 870 ntBASIC17.27■□□□□ 0.36
COPS3Q9UNS2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COPS3Q9UNS2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COPS3Q9UNS2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
COPS3Q9UNS2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.27■□□□□ 0.35
COPS3Q9UNS2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.27■□□□□ 0.35
COPS3Q9UNS2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.27■□□□□ 0.35
COPS3Q9UNS2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COPS3Q9UNS2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
COPS3Q9UNS2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
COPS3Q9UNS2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.26■□□□□ 0.35
COPS3Q9UNS2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 TFP1-202ENST00000475455 1573 ntBASIC17.26■□□□□ 0.35
COPS3Q9UNS2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 AIRN-201ENST00000601203 4374 ntBASIC17.26■□□□□ 0.35
COPS3Q9UNS2 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
COPS3Q9UNS2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COPS3Q9UNS2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms