Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 AF186192.3-201ENST00000583427 947 ntBASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 AP001412.1-201ENST00000608405 714 ntBASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 AC113410.3-201ENST00000623366 203 ntBASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 AC005332.7-201ENST00000614046 2005 ntBASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.92■□□□□ 0.94
GTF3C4Q9UKN8 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.91■□□□□ 0.94
GTF3C4Q9UKN8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GTF3C4Q9UKN8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GTF3C4Q9UKN8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
GTF3C4Q9UKN8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GTF3C4Q9UKN8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.91■□□□□ 0.94
GTF3C4Q9UKN8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
GTF3C4Q9UKN8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.91■□□□□ 0.94
GTF3C4Q9UKN8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GTF3C4Q9UKN8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
GTF3C4Q9UKN8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.91■□□□□ 0.94
GTF3C4Q9UKN8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.91■□□□□ 0.94
GTF3C4Q9UKN8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
GTF3C4Q9UKN8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.91■□□□□ 0.94
GTF3C4Q9UKN8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
GTF3C4Q9UKN8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GTF3C4Q9UKN8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GTF3C4Q9UKN8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GTF3C4Q9UKN8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
GTF3C4Q9UKN8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GTF3C4Q9UKN8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.89■□□□□ 0.94
GTF3C4Q9UKN8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
GTF3C4Q9UKN8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
GTF3C4Q9UKN8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
GTF3C4Q9UKN8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
GTF3C4Q9UKN8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.89■□□□□ 0.93
GTF3C4Q9UKN8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GTF3C4Q9UKN8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.89■□□□□ 0.93
GTF3C4Q9UKN8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GTF3C4Q9UKN8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
GTF3C4Q9UKN8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
GTF3C4Q9UKN8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GTF3C4Q9UKN8 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.89■□□□□ 0.93
GTF3C4Q9UKN8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GTF3C4Q9UKN8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GTF3C4Q9UKN8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
GTF3C4Q9UKN8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 YBX1P10-201ENST00000444752 975 ntBASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.88■□□□□ 0.93
GTF3C4Q9UKN8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms