Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.32■□□□□ 0.68
SPASTQ9UBP0 AC116562.2-201ENST00000507042 360 ntBASIC19.32■□□□□ 0.68
SPASTQ9UBP0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.32■□□□□ 0.68
SPASTQ9UBP0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.32■□□□□ 0.68
SPASTQ9UBP0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SPASTQ9UBP0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPASTQ9UBP0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SPASTQ9UBP0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPASTQ9UBP0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPASTQ9UBP0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.32■□□□□ 0.68
SPASTQ9UBP0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.32■□□□□ 0.68
SPASTQ9UBP0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.32■□□□□ 0.68
SPASTQ9UBP0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SPASTQ9UBP0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPASTQ9UBP0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SPASTQ9UBP0 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SPASTQ9UBP0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.31■□□□□ 0.68
SPASTQ9UBP0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SPASTQ9UBP0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPASTQ9UBP0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPASTQ9UBP0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.31■□□□□ 0.68
SPASTQ9UBP0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPASTQ9UBP0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPASTQ9UBP0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPASTQ9UBP0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPASTQ9UBP0 AC079598.2-202ENST00000546624 1451 ntBASIC19.31■□□□□ 0.68
SPASTQ9UBP0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.31■□□□□ 0.68
SPASTQ9UBP0 TUBB8P6-201ENST00000436895 1288 ntBASIC19.31■□□□□ 0.68
SPASTQ9UBP0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.31■□□□□ 0.68
SPASTQ9UBP0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.31■□□□□ 0.68
SPASTQ9UBP0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SPASTQ9UBP0 AP000525.1-201ENST00000608286 694 ntBASIC19.31■□□□□ 0.68
SPASTQ9UBP0 AL031985.4-201ENST00000642138 673 ntBASIC19.31■□□□□ 0.68
SPASTQ9UBP0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.31■□□□□ 0.68
SPASTQ9UBP0 PHGDH-210ENST00000641115 1638 ntBASIC19.31■□□□□ 0.68
SPASTQ9UBP0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.31■□□□□ 0.68
SPASTQ9UBP0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.31■□□□□ 0.68
SPASTQ9UBP0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 AC007952.6-201ENST00000573168 2673 ntBASIC19.3■□□□□ 0.68
SPASTQ9UBP0 AC003957.1-201ENST00000625108 2673 ntBASIC19.3■□□□□ 0.68
SPASTQ9UBP0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 MIR1238-201ENST00000408483 83 ntBASIC19.3■□□□□ 0.68
SPASTQ9UBP0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SPASTQ9UBP0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.29■□□□□ 0.68
SPASTQ9UBP0 AL162377.1-201ENST00000618844 1793 ntBASIC19.29■□□□□ 0.68
SPASTQ9UBP0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SPASTQ9UBP0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SPASTQ9UBP0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.29■□□□□ 0.68
SPASTQ9UBP0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.29■□□□□ 0.68
SPASTQ9UBP0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
SPASTQ9UBP0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPASTQ9UBP0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPASTQ9UBP0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPASTQ9UBP0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.29■□□□□ 0.68
SPASTQ9UBP0 KRT18P16-201ENST00000510337 1294 ntBASIC19.29■□□□□ 0.68
SPASTQ9UBP0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.29■□□□□ 0.68
SPASTQ9UBP0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
SPASTQ9UBP0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SPASTQ9UBP0 AL445675.2-201ENST00000620291 557 ntBASIC19.29■□□□□ 0.68
SPASTQ9UBP0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SPASTQ9UBP0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SPASTQ9UBP0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPASTQ9UBP0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SPASTQ9UBP0 AC112907.3-201ENST00000577781 2400 ntBASIC19.29■□□□□ 0.68
SPASTQ9UBP0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 AC010331.1-201ENST00000611423 582 ntBASIC19.28■□□□□ 0.68
SPASTQ9UBP0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPASTQ9UBP0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms