Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
NDE1Q9NXR1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NDE1Q9NXR1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 AC006333.2-201ENST00000607957 2099 ntBASIC18.77■□□□□ 0.6
NDE1Q9NXR1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NDE1Q9NXR1 NOC2LP1-202ENST00000452600 2235 ntBASIC18.77■□□□□ 0.59
NDE1Q9NXR1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.77■□□□□ 0.59
NDE1Q9NXR1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
NDE1Q9NXR1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
NDE1Q9NXR1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NDE1Q9NXR1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 PHGDH-210ENST00000641115 1638 ntBASIC18.76■□□□□ 0.59
NDE1Q9NXR1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 MIR939-201ENST00000401314 82 ntBASIC18.76■□□□□ 0.59
NDE1Q9NXR1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.76■□□□□ 0.59
NDE1Q9NXR1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms