Protein–RNA interactions for Protein: Q9NV58

RNF19A, E3 ubiquitin-protein ligase RNF19A, humanhuman

Predictions only

Length 838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF19AQ9NV58 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF19AQ9NV58 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF19AQ9NV58 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF19AQ9NV58 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF19AQ9NV58 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.1■□□□□ 0.97
RNF19AQ9NV58 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RNF19AQ9NV58 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RNF19AQ9NV58 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF19AQ9NV58 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF19AQ9NV58 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF19AQ9NV58 AC004951.3-201ENST00000418645 1148 ntBASIC21.1■□□□□ 0.97
RNF19AQ9NV58 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF19AQ9NV58 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RNF19AQ9NV58 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RNF19AQ9NV58 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF19AQ9NV58 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF19AQ9NV58 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.1■□□□□ 0.97
RNF19AQ9NV58 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF19AQ9NV58 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
RNF19AQ9NV58 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RNF19AQ9NV58 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RNF19AQ9NV58 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF19AQ9NV58 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 AC091390.4-202ENST00000476426 537 ntBASIC21.09■□□□□ 0.97
RNF19AQ9NV58 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 NTF6B-201ENST00000591913 560 ntBASIC21.09■□□□□ 0.97
RNF19AQ9NV58 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 AC096733.2-201ENST00000609937 1394 ntBASIC21.09■□□□□ 0.97
RNF19AQ9NV58 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF19AQ9NV58 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF19AQ9NV58 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.08■□□□□ 0.97
RNF19AQ9NV58 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF19AQ9NV58 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF19AQ9NV58 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF19AQ9NV58 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF19AQ9NV58 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF19AQ9NV58 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF19AQ9NV58 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF19AQ9NV58 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF19AQ9NV58 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF19AQ9NV58 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RNF19AQ9NV58 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF19AQ9NV58 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF19AQ9NV58 WWOX-216ENST00000569818 525 ntBASIC21.08■□□□□ 0.97
RNF19AQ9NV58 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF19AQ9NV58 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RNF19AQ9NV58 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF19AQ9NV58 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF19AQ9NV58 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.08■□□□□ 0.96
RNF19AQ9NV58 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF19AQ9NV58 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.08■□□□□ 0.96
RNF19AQ9NV58 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF19AQ9NV58 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF19AQ9NV58 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF19AQ9NV58 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF19AQ9NV58 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF19AQ9NV58 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RNF19AQ9NV58 AP001271.2-201ENST00000624018 1556 ntBASIC21.07■□□□□ 0.96
RNF19AQ9NV58 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF19AQ9NV58 KRT8P8-201ENST00000434750 1448 ntBASIC21.07■□□□□ 0.96
RNF19AQ9NV58 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
RNF19AQ9NV58 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF19AQ9NV58 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF19AQ9NV58 MFAP1P1-201ENST00000442257 1255 ntBASIC21.07■□□□□ 0.96
RNF19AQ9NV58 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.07■□□□□ 0.96
RNF19AQ9NV58 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RNF19AQ9NV58 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF19AQ9NV58 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF19AQ9NV58 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF19AQ9NV58 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF19AQ9NV58 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF19AQ9NV58 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF19AQ9NV58 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF19AQ9NV58 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF19AQ9NV58 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF19AQ9NV58 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms