Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRMT13Q9NUP7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRMT13Q9NUP7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
TRMT13Q9NUP7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TRMT13Q9NUP7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 AC005332.1-201ENST00000577698 1310 ntBASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 PRSS44-201ENST00000515154 1146 ntBASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRMT13Q9NUP7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 DUSP5P1-201ENST00000441325 1139 ntBASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 AC008622.2-201ENST00000617006 1229 ntBASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TRMT13Q9NUP7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRMT13Q9NUP7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRMT13Q9NUP7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRMT13Q9NUP7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.33■■□□□ 1.01
TRMT13Q9NUP7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.33■■□□□ 1.01
TRMT13Q9NUP7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TRMT13Q9NUP7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.33■■□□□ 1.01
TRMT13Q9NUP7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
TRMT13Q9NUP7 AC116407.4-201ENST00000623319 1061 ntBASIC21.33■■□□□ 1.01
TRMT13Q9NUP7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
TRMT13Q9NUP7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.33■■□□□ 1
TRMT13Q9NUP7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
TRMT13Q9NUP7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.33■■□□□ 1
TRMT13Q9NUP7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
TRMT13Q9NUP7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRMT13Q9NUP7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRMT13Q9NUP7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
TRMT13Q9NUP7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.32■■□□□ 1
TRMT13Q9NUP7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRMT13Q9NUP7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.32■■□□□ 1
TRMT13Q9NUP7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
TRMT13Q9NUP7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRMT13Q9NUP7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRMT13Q9NUP7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.32■■□□□ 1
TRMT13Q9NUP7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.32■■□□□ 1
TRMT13Q9NUP7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.32■■□□□ 1
TRMT13Q9NUP7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRMT13Q9NUP7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.32■■□□□ 1
TRMT13Q9NUP7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.32■■□□□ 1
TRMT13Q9NUP7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRMT13Q9NUP7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
TRMT13Q9NUP7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRMT13Q9NUP7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRMT13Q9NUP7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.32■■□□□ 1
TRMT13Q9NUP7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
TRMT13Q9NUP7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
TRMT13Q9NUP7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.31■■□□□ 1
TRMT13Q9NUP7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TRMT13Q9NUP7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRMT13Q9NUP7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TRMT13Q9NUP7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRMT13Q9NUP7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.31■■□□□ 1
TRMT13Q9NUP7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.31■■□□□ 1
TRMT13Q9NUP7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRMT13Q9NUP7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.31■■□□□ 1
TRMT13Q9NUP7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
TRMT13Q9NUP7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.31■■□□□ 1
TRMT13Q9NUP7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRMT13Q9NUP7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRMT13Q9NUP7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.31■■□□□ 1
TRMT13Q9NUP7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms