Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.27■□□□□ 0.51
KLHL1Q9NR64 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KLHL1Q9NR64 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KLHL1Q9NR64 PTBP1P-201ENST00000554374 1601 ntBASIC18.27■□□□□ 0.51
KLHL1Q9NR64 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KLHL1Q9NR64 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
KLHL1Q9NR64 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KLHL1Q9NR64 NBPF21P-201ENST00000425093 1451 ntBASIC18.26■□□□□ 0.51
KLHL1Q9NR64 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 KRT8P20-201ENST00000423953 1409 ntBASIC18.26■□□□□ 0.51
KLHL1Q9NR64 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.26■□□□□ 0.51
KLHL1Q9NR64 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 AC087289.5-201ENST00000586076 3175 ntBASIC18.26■□□□□ 0.51
KLHL1Q9NR64 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.26■□□□□ 0.51
KLHL1Q9NR64 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 RARRES2P10-201ENST00000564312 460 ntBASIC18.25■□□□□ 0.51
KLHL1Q9NR64 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 AL031963.3-201ENST00000606441 850 ntBASIC18.25■□□□□ 0.51
KLHL1Q9NR64 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 DPP3P2-201ENST00000416030 1696 ntBASIC18.25■□□□□ 0.51
KLHL1Q9NR64 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.25■□□□□ 0.51
KLHL1Q9NR64 KRT17P2-201ENST00000300992 1314 ntBASIC18.24■□□□□ 0.51
KLHL1Q9NR64 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 AC113410.3-201ENST00000623366 203 ntBASIC18.24■□□□□ 0.51
KLHL1Q9NR64 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KLHL1Q9NR64 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.23■□□□□ 0.51
KLHL1Q9NR64 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.23■□□□□ 0.51
KLHL1Q9NR64 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL1Q9NR64 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL1Q9NR64 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL1Q9NR64 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
KLHL1Q9NR64 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
KLHL1Q9NR64 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL1Q9NR64 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.23■□□□□ 0.51
KLHL1Q9NR64 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL1Q9NR64 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL1Q9NR64 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL1Q9NR64 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KLHL1Q9NR64 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms