Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.6■□□□□ 0.57
NECTIN3Q9NQS3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 AL158047.1-201ENST00000445918 881 ntBASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 RPPH1-201ENST00000516869 333 ntBASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 AL691432.2-201ENST00000607222 2038 ntBASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
NECTIN3Q9NQS3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NECTIN3Q9NQS3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NECTIN3Q9NQS3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NECTIN3Q9NQS3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NECTIN3Q9NQS3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.58■□□□□ 0.57
NECTIN3Q9NQS3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
NECTIN3Q9NQS3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NECTIN3Q9NQS3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
NECTIN3Q9NQS3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NECTIN3Q9NQS3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
NECTIN3Q9NQS3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NECTIN3Q9NQS3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NECTIN3Q9NQS3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.58■□□□□ 0.56
NECTIN3Q9NQS3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.58■□□□□ 0.56
NECTIN3Q9NQS3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
NECTIN3Q9NQS3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.58■□□□□ 0.56
NECTIN3Q9NQS3 PHGDH-210ENST00000641115 1638 ntBASIC18.58■□□□□ 0.56
NECTIN3Q9NQS3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
NECTIN3Q9NQS3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NECTIN3Q9NQS3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NECTIN3Q9NQS3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.58■□□□□ 0.56
NECTIN3Q9NQS3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.58■□□□□ 0.56
NECTIN3Q9NQS3 AC018553.1-201ENST00000616682 1458 ntBASIC18.58■□□□□ 0.56
NECTIN3Q9NQS3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NECTIN3Q9NQS3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NECTIN3Q9NQS3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.58■□□□□ 0.56
NECTIN3Q9NQS3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 TCF3P1-201ENST00000423021 1937 ntBASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 AC116351.2-201ENST00000606540 1585 ntBASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 PRKY-204ENST00000533551 1019 ntBASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NECTIN3Q9NQS3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 KRASP1-201ENST00000407852 552 ntBASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 AC124016.1-201ENST00000609552 612 ntBASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NECTIN3Q9NQS3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms