Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ZNF304Q9HCX3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 BX088651.1-201ENST00000540551 451 ntBASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF304Q9HCX3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 TCF3P1-201ENST00000423021 1937 ntBASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 REXO1L12P-201ENST00000622156 912 ntBASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 AC131212.4-201ENST00000623606 975 ntBASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF304Q9HCX3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 TSPY15P-201ENST00000457163 923 ntBASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ZNF304Q9HCX3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF304Q9HCX3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ZNF304Q9HCX3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF304Q9HCX3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
ZNF304Q9HCX3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.41■□□□□ 0.54
ZNF304Q9HCX3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF304Q9HCX3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ZNF304Q9HCX3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ZNF304Q9HCX3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms