Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.42■□□□□ 0.22
HES4Q9HCC6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HES4Q9HCC6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HES4Q9HCC6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HES4Q9HCC6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.42■□□□□ 0.22
HES4Q9HCC6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.42■□□□□ 0.22
HES4Q9HCC6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HES4Q9HCC6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HES4Q9HCC6 KRT8P8-201ENST00000434750 1448 ntBASIC16.42■□□□□ 0.22
HES4Q9HCC6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HES4Q9HCC6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HES4Q9HCC6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.42■□□□□ 0.22
HES4Q9HCC6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HES4Q9HCC6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HES4Q9HCC6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HES4Q9HCC6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HES4Q9HCC6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
HES4Q9HCC6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HES4Q9HCC6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HES4Q9HCC6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HES4Q9HCC6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HES4Q9HCC6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HES4Q9HCC6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HES4Q9HCC6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HES4Q9HCC6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HES4Q9HCC6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HES4Q9HCC6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HES4Q9HCC6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HES4Q9HCC6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HES4Q9HCC6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HES4Q9HCC6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HES4Q9HCC6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HES4Q9HCC6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HES4Q9HCC6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
HES4Q9HCC6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HES4Q9HCC6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HES4Q9HCC6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HES4Q9HCC6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 KRT17P3-201ENST00000420566 1262 ntBASIC16.4■□□□□ 0.22
HES4Q9HCC6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HES4Q9HCC6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HES4Q9HCC6 AC069544.1-201ENST00000609399 999 ntBASIC16.4■□□□□ 0.22
HES4Q9HCC6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HES4Q9HCC6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HES4Q9HCC6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.4■□□□□ 0.22
HES4Q9HCC6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HES4Q9HCC6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HES4Q9HCC6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HES4Q9HCC6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.39■□□□□ 0.21
HES4Q9HCC6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.39■□□□□ 0.21
HES4Q9HCC6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HES4Q9HCC6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.39■□□□□ 0.21
HES4Q9HCC6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HES4Q9HCC6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HES4Q9HCC6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HES4Q9HCC6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HES4Q9HCC6 TUBB8P6-201ENST00000436895 1288 ntBASIC16.39■□□□□ 0.21
HES4Q9HCC6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.39■□□□□ 0.21
HES4Q9HCC6 PRKY-204ENST00000533551 1019 ntBASIC16.39■□□□□ 0.21
HES4Q9HCC6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.39■□□□□ 0.21
HES4Q9HCC6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HES4Q9HCC6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HES4Q9HCC6 MTDHP1-201ENST00000605323 784 ntBASIC16.39■□□□□ 0.21
HES4Q9HCC6 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms