Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP6V0A4Q9HBG4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.61■■□□□ 1.05
ATP6V0A4Q9HBG4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATP6V0A4Q9HBG4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.61■■□□□ 1.05
ATP6V0A4Q9HBG4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP6V0A4Q9HBG4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
ATP6V0A4Q9HBG4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.61■■□□□ 1.05
ATP6V0A4Q9HBG4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.61■■□□□ 1.05
ATP6V0A4Q9HBG4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP6V0A4Q9HBG4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.61■■□□□ 1.05
ATP6V0A4Q9HBG4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.61■■□□□ 1.05
ATP6V0A4Q9HBG4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATP6V0A4Q9HBG4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP6V0A4Q9HBG4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ATP6V0A4Q9HBG4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.61■■□□□ 1.05
ATP6V0A4Q9HBG4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP6V0A4Q9HBG4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATP6V0A4Q9HBG4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 HLA-A-209ENST00000638375 975 ntBASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP6V0A4Q9HBG4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V0A4Q9HBG4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP6V0A4Q9HBG4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V0A4Q9HBG4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
ATP6V0A4Q9HBG4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V0A4Q9HBG4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V0A4Q9HBG4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V0A4Q9HBG4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V0A4Q9HBG4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.58■■□□□ 1.05
ATP6V0A4Q9HBG4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP6V0A4Q9HBG4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V0A4Q9HBG4 NUDT16P1-203ENST00000513809 620 ntBASIC21.58■■□□□ 1.05
ATP6V0A4Q9HBG4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V0A4Q9HBG4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
ATP6V0A4Q9HBG4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATP6V0A4Q9HBG4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATP6V0A4Q9HBG4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
ATP6V0A4Q9HBG4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms