Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 AP003097.1-201ENST00000530657 1135 ntBASIC18.56■□□□□ 0.56
BRF2Q9HAW0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 AC087289.5-201ENST00000586076 3175 ntBASIC18.56■□□□□ 0.56
BRF2Q9HAW0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 TEX21P-204ENST00000641479 1693 ntBASIC18.55■□□□□ 0.56
BRF2Q9HAW0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 KRT17P3-201ENST00000420566 1262 ntBASIC18.54■□□□□ 0.56
BRF2Q9HAW0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 AC026366.1-201ENST00000488803 879 ntBASIC18.54■□□□□ 0.56
BRF2Q9HAW0 RNA5SP413-201ENST00000516373 109 ntBASIC18.54■□□□□ 0.56
BRF2Q9HAW0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 TNXA-203ENST00000507684 2038 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms