Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
BRF2Q9HAW0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 AP003097.1-201ENST00000530657 1135 ntBASIC18.56■□□□□ 0.56
BRF2Q9HAW0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 AC087289.5-201ENST00000586076 3175 ntBASIC18.56■□□□□ 0.56
BRF2Q9HAW0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.56■□□□□ 0.56
BRF2Q9HAW0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 TEX21P-204ENST00000641479 1693 ntBASIC18.55■□□□□ 0.56
BRF2Q9HAW0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.55■□□□□ 0.56
BRF2Q9HAW0 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 KRT17P3-201ENST00000420566 1262 ntBASIC18.54■□□□□ 0.56
BRF2Q9HAW0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 AC026366.1-201ENST00000488803 879 ntBASIC18.54■□□□□ 0.56
BRF2Q9HAW0 RNA5SP413-201ENST00000516373 109 ntBASIC18.54■□□□□ 0.56
BRF2Q9HAW0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BRF2Q9HAW0 TNXA-203ENST00000507684 2038 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms