Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
UPF2Q9HAU5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UPF2Q9HAU5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
UPF2Q9HAU5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UPF2Q9HAU5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
UPF2Q9HAU5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UPF2Q9HAU5 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.81■■□□□ 1.4
UPF2Q9HAU5 RARRES2P4-201ENST00000514074 484 ntBASIC23.81■■□□□ 1.4
UPF2Q9HAU5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
UPF2Q9HAU5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
UPF2Q9HAU5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UPF2Q9HAU5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.81■■□□□ 1.4
UPF2Q9HAU5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UPF2Q9HAU5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
UPF2Q9HAU5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
UPF2Q9HAU5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC23.81■■□□□ 1.4
UPF2Q9HAU5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UPF2Q9HAU5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
UPF2Q9HAU5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.8■■□□□ 1.4
UPF2Q9HAU5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC23.79■■□□□ 1.4
UPF2Q9HAU5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC23.79■■□□□ 1.4
UPF2Q9HAU5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC23.79■■□□□ 1.4
UPF2Q9HAU5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UPF2Q9HAU5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC23.79■■□□□ 1.4
UPF2Q9HAU5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UPF2Q9HAU5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.79■■□□□ 1.4
UPF2Q9HAU5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.79■■□□□ 1.4
UPF2Q9HAU5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC23.79■■□□□ 1.4
UPF2Q9HAU5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
UPF2Q9HAU5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.79■■□□□ 1.4
UPF2Q9HAU5 AC023632.3-201ENST00000521633 145 ntBASIC23.79■■□□□ 1.4
UPF2Q9HAU5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
UPF2Q9HAU5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
UPF2Q9HAU5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UPF2Q9HAU5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
UPF2Q9HAU5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.79■■□□□ 1.4
UPF2Q9HAU5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
UPF2Q9HAU5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 KRT18P61-201ENST00000585825 1298 ntBASIC23.78■■□□□ 1.4
UPF2Q9HAU5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
UPF2Q9HAU5 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
UPF2Q9HAU5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms