Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC68Q9H2F9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC68Q9H2F9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC68Q9H2F9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC68Q9H2F9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC68Q9H2F9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC68Q9H2F9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC68Q9H2F9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC68Q9H2F9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC68Q9H2F9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC68Q9H2F9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC68Q9H2F9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC68Q9H2F9 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC68Q9H2F9 AC093484.2-201ENST00000580996 2166 ntBASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 SOX15-203ENST00000570788 1093 ntBASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC68Q9H2F9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC68Q9H2F9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 AC120498.8-201ENST00000614275 531 ntBASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC68Q9H2F9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC68Q9H2F9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC68Q9H2F9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC68Q9H2F9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC68Q9H2F9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC68Q9H2F9 AP006587.1-201ENST00000534129 1502 ntBASIC19.41■□□□□ 0.7
CCDC68Q9H2F9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC68Q9H2F9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms