Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
NUCKS1Q9H1E3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NUCKS1Q9H1E3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NUCKS1Q9H1E3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NUCKS1Q9H1E3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.02■□□□□ 0.96
NUCKS1Q9H1E3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NUCKS1Q9H1E3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NUCKS1Q9H1E3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.02■□□□□ 0.96
NUCKS1Q9H1E3 MIR4651-201ENST00000582622 73 ntBASIC21.02■□□□□ 0.96
NUCKS1Q9H1E3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.02■□□□□ 0.96
NUCKS1Q9H1E3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NUCKS1Q9H1E3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NUCKS1Q9H1E3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.02■□□□□ 0.96
NUCKS1Q9H1E3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NUCKS1Q9H1E3 AC141586.3-201ENST00000562166 1838 ntBASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 ZNF815P-204ENST00000434898 1737 ntBASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NUCKS1Q9H1E3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 HES2-206ENST00000489730 730 ntTSL 2 BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
NUCKS1Q9H1E3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.99■□□□□ 0.95
NUCKS1Q9H1E3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms