Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDCA4Q9BXL8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA4Q9BXL8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDCA4Q9BXL8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA4Q9BXL8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.41■□□□□ 0.38
CDCA4Q9BXL8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA4Q9BXL8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA4Q9BXL8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA4Q9BXL8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.41■□□□□ 0.38
CDCA4Q9BXL8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA4Q9BXL8 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.41■□□□□ 0.38
CDCA4Q9BXL8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.41■□□□□ 0.38
CDCA4Q9BXL8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CDCA4Q9BXL8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDCA4Q9BXL8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.41■□□□□ 0.38
CDCA4Q9BXL8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.41■□□□□ 0.38
CDCA4Q9BXL8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA4Q9BXL8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA4Q9BXL8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CDCA4Q9BXL8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.39■□□□□ 0.38
CDCA4Q9BXL8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.39■□□□□ 0.38
CDCA4Q9BXL8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CDCA4Q9BXL8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CDCA4Q9BXL8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.39■□□□□ 0.38
CDCA4Q9BXL8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 AL591742.1-201ENST00000604433 565 ntBASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 AC092666.2-201ENST00000613287 246 ntBASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.39■□□□□ 0.37
CDCA4Q9BXL8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms