Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC073912.3-201ENST00000624414 853 ntBASIC16.2■□□□□ 0.18
SSBP3Q9BWW4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SSBP3Q9BWW4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSBP3Q9BWW4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSBP3Q9BWW4 AC009237.14-201ENST00000609975 1594 ntBASIC16.2■□□□□ 0.18
SSBP3Q9BWW4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.2■□□□□ 0.18
SSBP3Q9BWW4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SSBP3Q9BWW4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SSBP3Q9BWW4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.2■□□□□ 0.18
SSBP3Q9BWW4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SSBP3Q9BWW4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 AL445675.2-201ENST00000620291 557 ntBASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 KRT8P8-201ENST00000434750 1448 ntBASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SSBP3Q9BWW4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 BX088651.1-201ENST00000540551 451 ntBASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 AL355075.4-201ENST00000554988 638 ntBASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 AL031985.4-201ENST00000642138 673 ntBASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SSBP3Q9BWW4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SSBP3Q9BWW4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms