Protein–RNA interactions for Protein: Q99816

TSG101, Tumor susceptibility gene 101 protein, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101Q99816 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TSG101Q99816 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TSG101Q99816 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSG101Q99816 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSG101Q99816 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
TSG101Q99816 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSG101Q99816 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSG101Q99816 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TSG101Q99816 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.43■■□□□ 1.02
TSG101Q99816 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSG101Q99816 HLA-L-209ENST00000420110 1011 ntBASIC21.43■■□□□ 1.02
TSG101Q99816 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.43■■□□□ 1.02
TSG101Q99816 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.43■■□□□ 1.02
TSG101Q99816 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSG101Q99816 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSG101Q99816 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.43■■□□□ 1.02
TSG101Q99816 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSG101Q99816 ZNF815P-204ENST00000434898 1737 ntBASIC21.43■■□□□ 1.02
TSG101Q99816 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TSG101Q99816 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.43■■□□□ 1.02
TSG101Q99816 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
TSG101Q99816 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TSG101Q99816 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSG101Q99816 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.42■■□□□ 1.02
TSG101Q99816 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.42■■□□□ 1.02
TSG101Q99816 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSG101Q99816 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TSG101Q99816 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSG101Q99816 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.42■■□□□ 1.02
TSG101Q99816 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
TSG101Q99816 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.42■■□□□ 1.02
TSG101Q99816 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.42■■□□□ 1.02
TSG101Q99816 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.42■■□□□ 1.02
TSG101Q99816 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TSG101Q99816 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.42■■□□□ 1.02
TSG101Q99816 UNC93B4-201ENST00000505679 747 ntBASIC21.42■■□□□ 1.02
TSG101Q99816 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.42■■□□□ 1.02
TSG101Q99816 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.42■■□□□ 1.02
TSG101Q99816 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.42■■□□□ 1.02
TSG101Q99816 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSG101Q99816 HCG11-201ENST00000411553 5696 ntBASIC21.42■■□□□ 1.02
TSG101Q99816 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSG101Q99816 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
TSG101Q99816 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TSG101Q99816 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TSG101Q99816 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.41■■□□□ 1.02
TSG101Q99816 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TSG101Q99816 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSG101Q99816 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.41■■□□□ 1.02
TSG101Q99816 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSG101Q99816 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TSG101Q99816 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.41■■□□□ 1.02
TSG101Q99816 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.41■■□□□ 1.02
TSG101Q99816 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.41■■□□□ 1.02
TSG101Q99816 KRT8P8-201ENST00000434750 1448 ntBASIC21.41■■□□□ 1.02
TSG101Q99816 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSG101Q99816 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.41■■□□□ 1.02
TSG101Q99816 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TSG101Q99816 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TSG101Q99816 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.41■■□□□ 1.02
TSG101Q99816 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.41■■□□□ 1.02
TSG101Q99816 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.41■■□□□ 1.02
TSG101Q99816 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
TSG101Q99816 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.41■■□□□ 1.02
TSG101Q99816 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TSG101Q99816 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSG101Q99816 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
TSG101Q99816 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSG101Q99816 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.41■■□□□ 1.02
TSG101Q99816 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TSG101Q99816 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TSG101Q99816 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TSG101Q99816 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TSG101Q99816 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSG101Q99816 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSG101Q99816 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
TSG101Q99816 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSG101Q99816 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSG101Q99816 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TSG101Q99816 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSG101Q99816 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TSG101Q99816 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.4■■□□□ 1.02
TSG101Q99816 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TSG101Q99816 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.4■■□□□ 1.02
TSG101Q99816 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSG101Q99816 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSG101Q99816 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
TSG101Q99816 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSG101Q99816 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSG101Q99816 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TSG101Q99816 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
TSG101Q99816 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TSG101Q99816 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TSG101Q99816 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TSG101Q99816 AP000974.1-201ENST00000623909 2387 ntBASIC21.39■■□□□ 1.02
TSG101Q99816 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.02
TSG101Q99816 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TSG101Q99816 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TSG101Q99816 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.39■■□□□ 1.01
TSG101Q99816 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms