Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP4Q99727 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP4Q99727 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP4Q99727 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.82■□□□□ 0.44
TIMP4Q99727 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.82■□□□□ 0.44
TIMP4Q99727 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.82■□□□□ 0.44
TIMP4Q99727 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.82■□□□□ 0.44
TIMP4Q99727 HTR7P1-201ENST00000538670 1336 ntBASIC17.82■□□□□ 0.44
TIMP4Q99727 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP4Q99727 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP4Q99727 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP4Q99727 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TIMP4Q99727 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP4Q99727 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP4Q99727 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.82■□□□□ 0.44
TIMP4Q99727 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.82■□□□□ 0.44
TIMP4Q99727 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.82■□□□□ 0.44
TIMP4Q99727 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP4Q99727 AC004408.2-201ENST00000623613 2777 ntBASIC17.82■□□□□ 0.44
TIMP4Q99727 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TIMP4Q99727 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.81■□□□□ 0.44
TIMP4Q99727 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.81■□□□□ 0.44
TIMP4Q99727 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
TIMP4Q99727 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TIMP4Q99727 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 TSPY7P-201ENST00000431358 1114 ntBASIC17.81■□□□□ 0.44
TIMP4Q99727 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.81■□□□□ 0.44
TIMP4Q99727 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.81■□□□□ 0.44
TIMP4Q99727 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.81■□□□□ 0.44
TIMP4Q99727 AC113410.3-201ENST00000623366 203 ntBASIC17.81■□□□□ 0.44
TIMP4Q99727 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.81■□□□□ 0.44
TIMP4Q99727 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.81■□□□□ 0.44
TIMP4Q99727 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.81■□□□□ 0.44
TIMP4Q99727 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.81■□□□□ 0.44
TIMP4Q99727 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TIMP4Q99727 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TIMP4Q99727 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TIMP4Q99727 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TIMP4Q99727 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP4Q99727 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP4Q99727 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP4Q99727 KRT17P2-201ENST00000300992 1314 ntBASIC17.8■□□□□ 0.44
TIMP4Q99727 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP4Q99727 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.8■□□□□ 0.44
TIMP4Q99727 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP4Q99727 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.8■□□□□ 0.44
TIMP4Q99727 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP4Q99727 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TIMP4Q99727 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TIMP4Q99727 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP4Q99727 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP4Q99727 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.8■□□□□ 0.44
TIMP4Q99727 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP4Q99727 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TIMP4Q99727 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
TIMP4Q99727 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP4Q99727 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.79■□□□□ 0.44
TIMP4Q99727 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP4Q99727 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP4Q99727 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.79■□□□□ 0.44
TIMP4Q99727 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TIMP4Q99727 AC116351.2-201ENST00000606540 1585 ntBASIC17.79■□□□□ 0.44
TIMP4Q99727 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP4Q99727 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP4Q99727 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP4Q99727 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP4Q99727 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP4Q99727 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP4Q99727 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP4Q99727 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP4Q99727 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP4Q99727 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.79■□□□□ 0.44
TIMP4Q99727 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP4Q99727 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.79■□□□□ 0.44
TIMP4Q99727 AF186192.3-201ENST00000583427 947 ntBASIC17.79■□□□□ 0.44
TIMP4Q99727 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.79■□□□□ 0.44
TIMP4Q99727 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.79■□□□□ 0.44
TIMP4Q99727 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMP4Q99727 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TIMP4Q99727 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.79■□□□□ 0.44
TIMP4Q99727 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TIMP4Q99727 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms