Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 AC016734.2-201ENST00000624325 1377 ntBASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 HTR5BP-201ENST00000430851 1154 ntBASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 AL121672.3-201ENST00000608644 468 ntBASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CNTNAP3BQ96NU0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 PMS2P7-201ENST00000506558 1336 ntBASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 AC008040.2-201ENST00000461049 708 ntBASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 HLA-J-203ENST00000494367 1087 ntBASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 AP002414.4-201ENST00000589764 1148 ntBASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 AC239800.4-201ENST00000603712 296 ntBASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.55■□□□□ 0.56
CNTNAP3BQ96NU0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 BX119927.1-201ENST00000636596 1552 ntBASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CNTNAP3BQ96NU0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3BQ96NU0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3BQ96NU0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3BQ96NU0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3BQ96NU0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3BQ96NU0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CNTNAP3BQ96NU0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3BQ96NU0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3BQ96NU0 RCC2P6-201ENST00000526625 1557 ntBASIC18.53■□□□□ 0.56
CNTNAP3BQ96NU0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CNTNAP3BQ96NU0 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3BQ96NU0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
CNTNAP3BQ96NU0 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.53■□□□□ 0.56
CNTNAP3BQ96NU0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3BQ96NU0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CNTNAP3BQ96NU0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.53■□□□□ 0.56
CNTNAP3BQ96NU0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.52■□□□□ 0.56
CNTNAP3BQ96NU0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNTNAP3BQ96NU0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNTNAP3BQ96NU0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNTNAP3BQ96NU0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CNTNAP3BQ96NU0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms